| http://purl.uniprot.org/unirules/MF_01147#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01147#construct-template-64 |
| http://purl.uniprot.org/unirules/MF_01147#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01147#construct-template-63 |
| http://purl.uniprot.org/unirules/MF_01147#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01147#construct-template-66 |
| http://purl.uniprot.org/unirules/MF_01147#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01147#construct-template-65 |
| http://purl.uniprot.org/unirules/MF_01147#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01147#construct-template-60 |
| http://purl.uniprot.org/unirules/MF_01147#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01147#construct-template-84 |
| http://purl.uniprot.org/unirules/MF_01147#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01147#construct-template-83 |
| http://purl.uniprot.org/unirules/MF_01147#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01147#construct-template-86 |
| http://purl.uniprot.org/unirules/MF_01147#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01147#construct-template-62 |
| http://purl.uniprot.org/unirules/MF_01147#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01147#construct-template-85 |
| http://purl.uniprot.org/unirules/MF_01147#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01147#construct-template-61 |
| http://purl.uniprot.org/unirules/MF_01147#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01147#construct-template-80 |
| http://purl.uniprot.org/unirules/MF_01147#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01147#construct-template-82 |
| http://purl.uniprot.org/unirules/MF_01147#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01147#construct-template-81 |
| http://purl.uniprot.org/unirules/MF_01147#construct | http://www.w3.org/ns/shacl#prefixes | http://purl.uniprot.org/unirules/ |
| http://purl.uniprot.org/unirules/MF_01147#construct | http://spinrdf.org/sp#where | http://purl.uniprot.org/unirules/MF_01147#construct-where-list-0 |
| http://purl.uniprot.org/unirules/MF_01147#construct | http://spinrdf.org/sp#templates | http://purl.uniprot.org/unirules/MF_01147#construct-template-list-0 |
| http://purl.uniprot.org/unirules/MF_01147#construct | http://www.w3.org/ns/shacl#construct | "CONSTRUCT {
_:401051 up:source unirule:MF_01147 .
_:401052 up:source unirule:MF_01147 .
_:401053 up:source unirule:MF_01147 .
_:401054 up:source unirule:MF_01147 .
_:401055 up:source unirule:MF_01147 .
_:401056 up:source unirule:MF_01147 .
_:401057 up:source unirule:MF_01147 .
_:401058 up:source unirule:MF_01147 .
_:401059 up:source unirule:MF_01147 .
_:401060 up:source unirule:MF_01147 .
_:401061 up:source unirule:MF_01147 .
_:401062 up:source unirule:MF_01147 .
_:401063 up:source unirule:MF_01147 .
_:401064 up:source unirule:MF_01147 .
_:401065 up:source unirule:MF_01147 .
_:401066 up:source unirule:MF_01147 .
_:401067 up:source unirule:MF_01147 .
_:401068 up:source unirule:MF_01147 .
_:401069 up:source unirule:MF_01147 .
?this up:annotation ?annotation2 ,
?annotation3 ,
?annotation5 ,
?annotation6 ;
up:classifiedWith GO:0005886 ,
GO:0008961 ,
GO:0042158 ,
keyword:1003 ,
keyword:1133 ,
keyword:472 ,
keyword:808 ,
keyword:812 ;
up:recommendedName ?name0 .
?name0 up:ecName '2.5.1.145' ;
up:fullName 'Phosphatidylglycerol--prolipoprotein diacylglyceryl transferase' ;
rdf:type up:Structured_Name .
?gene1 skos:prefLabel 'lgt' .
?annotation2 a up:Function_Annotation ;
rdfs:comment 'Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins.' .
?annotation3 up:activity ?activity4 ;
rdf:type up:Catalytic_Activity_Annotation .
?activity4 up:catalyticActivity ;
up:enzymeClass .
?annotation5 a up:Pathway_Annotation ;
rdfs:comment 'Protein modification; lipoprotein biosynthesis (diacylglyceryl transfer).' .
?annotation6 a up:Similarity_Annotation ;
rdfs:comment 'Belongs to the Lgt family.' .
?case7 up:classifiedWith keyword:997 .
?pfs9 up:annotation ?annotation10 .
?annotation10 faldo:begin ?pfsb11 ;
faldo:end ?pfse12 ;
up:ligand ?ligand13 ;
rdf:type up:Binding_Site_Annotation .
?pfsb11 faldo:position ?thisPositionOn14 ;
rdf:type faldo:ExactPosition .
?pfse12 faldo:position ?thisPositionOn15 ;
rdf:type faldo:ExactPosition .
?ligand13 rdfs:subClassOf chebi:64716 .
?sam16 up:classifiedWith keyword:1133 ,
keyword:472 ,
keyword:812 .
?transmembrane17 faldo:begin ?transmembraneb18 ;
faldo:end ?transmembranee19 .
?transmembraneb18 faldo:position ?transmembranebp20 .
?transmembranee19 faldo:position ?transmembraneep21 .
?keyword22 up:range ?transmembrane17 .
?keyword23 up:range ?transmembrane17 .
?keyword24 up:range ?transmembrane17 .
_:401070 a rdf:Statement ;
up:attribution _:401051 ;
rdf:subject ?this ;
rdf:predicate up:recommendedName ;
rdf:object ?name0 .
_:401071 a rdf:Statement ;
up:attribution _:401052 ;
rdf:subject ?gene1 ;
rdf:predicate up:encodedBy ;
rdf:object ?gene1 .
_:401072 a rdf:Statement ;
up:attribution _:401053 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation2 .
_:401073 a rdf:Statement ;
up:attribution _:401054 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation3 .
_:401074 a rdf:Statement ;
up:attribution _:401055 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation5 .
_:401075 a rdf:Statement ;
up:attribution _:401056 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation6 .
_:401076 a rdf:Statement ;
up:attribution _:401057 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:1003 .
_:401077 a rdf:Statement ;
up:attribution _:401058 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:472 .
_:401078 a rdf:Statement ;
up:attribution _:401059 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:808 .
_:401079 a rdf:Statement ;
up:attribution _:401060 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:812 .
_:401080 a rdf:Statement ;
up:attribution _:401061 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:1133 .
_:401081 a rdf:Statement ;
up:attribution _:401062 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0008961 .
_:401082 a rdf:Statement ;
up:attribution _:401063 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0042158 .
_:401083 a rdf:Statement ;
up:attribution _:401064 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0005886 .
_:401084 a rdf:Statement ;
up:attribution _:401065 ;
rdf:subject ?case7 ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:997 .
_:401085 a rdf:Statement ;
up:source unirule:MF_01147 ;
rdf:subject ?pfs9 ;
rdf:predicate up:annotation ;
rdf:object ?annotation10 .
_:401086 a rdf:Statement ;
up:attribution _:401066 ;
rdf:subject ?pfs9 ;
rdf:predicate up:annotation ;
rdf:object ?annotation10 .
_:401087 a rdf:Statement ;
up:attribution _:401067 ;
rdf:subject ?sam16 ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:472 .
_:401088 a rdf:Statement ;
up:attribution _:401068 ;
rdf:subject ?sam16 ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:812 .
_:401089 a rdf:Statement ;
up:attribution _:401069 ;
rdf:subject ?sam16 ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:1133 .
}
WHERE {
#baseURI: http://purl.uniprot.org/unirule/MF_01147
#Rule MF_01147 Created by:? on:2005-02-28 Modified by:Edouard de Castro on:2024-09-03
?this up:organism ?thisOrganism ;
rdfs:seeAlso signature:MF_01147 .
?thisOrganism rdfs:subClassOf+ taxon:2 .
BIND(URI(CONCAT(STR(?this), '#MF_01147a0')) AS ?name0) .
BIND(URI(CONCAT(STR(?this), '#MF_01147a2')) AS ?annotation2) .
BIND(URI(CONCAT(STR(?this), '#MF_01147a3')) AS ?annotation3) .
BIND(URI(CONCAT(STR(?this), '#MF_01147a5')) AS ?annotation5) .
BIND(URI(CONCAT(STR(?this), '#MF_01147a6')) AS ?annotation6) .
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch29 faldo:location ?templateMotifSequenceMatchRegionP6095530 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP6095532 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarP60955MF_0114725 .
?templateMotifSequenceMatchRegionP6095530 faldo:begin ?templateMotifSequenceMatchBeginP6095531 .
?templateMotifSequenceMatchBeginP6095531 faldo:position ?templateMotifSequenceMatchBeginPositionP6095526 ;
faldo:reference isoform:P60955-1 .
?templateMotifSequenceProfileAlignmentOperationP6095532 edam:has_input signature:MF_01147 ;
rdf:type edam:operation_0300 .
?targetMotifMatch33 faldo:location ?targetMotifMatchRegionMatch34 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_0114736 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarP60955MF_0114727 .
?targetMotifMatchRegionMatch34 faldo:begin ?targetMotifMatchRegionMatchBeginMF_0114735 .
?targetMotifMatchRegionMatchBeginMF_0114735 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0114728 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_0114736 edam:has_input signature:MF_01147 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP60955MF_0114725, 1, (STRLEN(?templateMotifCigarP60955MF_0114725) - STRLEN(REPLACE(?templateMotifCigarP60955MF_0114725, CONCAT('^(?:-*[^-]){', STR(((143 - ?templateMotifSequenceMatchBeginPositionP6095526) + 1)), '}'), '')))), '[a-z]', '')) AS ?step137) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP60955MF_0114727, 1, (STRLEN(?targetMotifMatchCigarP60955MF_0114727) - STRLEN(REPLACE(?targetMotifMatchCigarP60955MF_0114727, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step137), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP60955MF_0114727, 1, (STRLEN(?targetMotifMatchCigarP60955MF_0114727) - STRLEN(REPLACE(?targetMotifMatchCigarP60955MF_0114727, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step137), '}'), '')))), '[^-]', ''))) AS ?step238) .
BIND(((?step238 + ?targetMotifMatchRegionMatchBeginPositionMF_0114728) - 1) AS ?thisPositionOn14) .
BIND(?thisPositionOn14 AS ?thisPositionOn15) .
BIND(?this AS ?pfs1t39) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn14))) AS ?pfsb11) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn15))) AS ?pfse12) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn14, 1) = 'R')) .
BIND(URI(CONCAT(STR(?this), '#MF_01147a10')) AS ?annotation10) .
BIND(?this AS ?pfs9) .
}
OPTIONAL {
?this a up:Protein .
{
?this up:proteome .
} UNION {
?this up:proteome ?p40 .
?p40 skos:narrower .
}
BIND(?this AS ?case7) .
}
OPTIONAL {
?this a up:Protein .
{
FILTER (! (EXISTS {
{
?this up:proteome .
} UNION {
?this up:proteome ?p41 .
?p41 skos:narrower .
}
})) .
} UNION {
{
?this up:proteome .
} UNION {
?this up:proteome ?p42 .
?p42 skos:narrower .
}
}
BIND(?this AS ?case8) .
}
OPTIONAL {
?this up:annotation ?samtransmembrane43 ;
up:sequence ?thisSequence .
?samtransmembrane43 up:range ?samtransmembraner44 ;
rdf:type up:Transmembrane_Annotation .
?samtransmembraner44 faldo:begin ?samtransmembraneb45 ;
faldo:end ?samtransmembranee46 .
?samtransmembraneb45 faldo:position ?samtransmembranebp47 ;
faldo:reference ?thisSequence .
?samtransmembranee46 faldo:position ?samtransmembraneep48 ;
faldo:reference ?thisSequence .
BIND(?this AS ?sam16) .
}
BIND(URI(CONCAT(STR(?this), '#MF_01147a22')) AS ?keyword22) .
BIND(URI(CONCAT(STR(?this), '#MF_01147a23')) AS ?keyword23) .
BIND(URI(CONCAT(STR(?this), '#MF_01147a24')) AS ?keyword24) .
}
"xsd:string |
| http://purl.uniprot.org/unirules/MF_01147 | http://www.w3.org/ns/shacl#rule | http://purl.uniprot.org/unirules/MF_01147#construct |
