| http://purl.uniprot.org/unirules/MF_01160#construct | http://www.w3.org/ns/shacl#construct | "CONSTRUCT {
_:404390 up:source unirule:MF_01160 .
_:404391 up:source unirule:MF_01160 .
_:404392 up:source unirule:MF_01160 .
_:404393 up:source unirule:MF_01160 .
_:404394 up:source unirule:MF_01160 .
_:404395 up:source unirule:MF_01160 .
_:404396 up:source unirule:MF_01160 .
_:404397 up:source unirule:MF_01160 .
_:404398 up:source unirule:MF_01160 .
_:404399 up:source unirule:MF_01160 .
_:404400 up:source unirule:MF_01160 .
_:404401 up:source unirule:MF_01160 .
_:404402 up:source unirule:MF_01160 .
_:404403 up:source unirule:MF_01160 .
?this up:annotation ?annotation2 ,
?annotation3 ,
?annotation4 ,
?annotation6 ;
up:classifiedWith GO:0005737 ,
keyword:963 ;
up:recommendedName ?name0 .
?name0 up:fullName 'Divalent-cation tolerance protein CutA' ;
rdf:type up:Structured_Name .
?gene1 skos:prefLabel 'cutA' .
?annotation2 a up:Function_Annotation ;
rdfs:comment 'Involved in resistance toward heavy metals.' .
?annotation3 a up:Subunit_Annotation ;
rdfs:comment 'Homotrimer.' .
?annotation4 a up:Subcellular_Location_Annotation .
?annotation4li5 up:cellularComponent .
?annotation6 a up:Similarity_Annotation ;
rdfs:comment 'Belongs to the CutA family.' .
?case7 up:classifiedWith GO:0005507 ,
keyword:186 ,
keyword:479 .
?pfs8 up:annotation ?annotation9 ,
?annotation15 ,
?annotation21 .
?annotation9 faldo:begin ?pfsb10 ;
faldo:end ?pfse11 ;
up:ligand ?ligand12 ;
rdf:type up:Binding_Site_Annotation .
?pfsb10 faldo:position ?thisPositionOn13 ;
rdf:type faldo:ExactPosition .
?pfse11 faldo:position ?thisPositionOn14 ;
rdf:type faldo:ExactPosition .
?ligand12 rdfs:subClassOf chebi:23378 .
?annotation15 faldo:begin ?pfsb16 ;
faldo:end ?pfse17 ;
up:ligand ?ligand18 ;
rdf:type up:Binding_Site_Annotation .
?pfsb16 faldo:position ?thisPositionOn19 ;
rdf:type faldo:ExactPosition .
?pfse17 faldo:position ?thisPositionOn20 ;
rdf:type faldo:ExactPosition .
?ligand18 rdfs:subClassOf chebi:23378 .
?annotation21 faldo:begin ?pfsb22 ;
faldo:end ?pfse23 ;
up:ligand ?ligand24 ;
rdf:type up:Binding_Site_Annotation .
?pfsb22 faldo:position ?thisPositionOn25 ;
rdf:type faldo:ExactPosition .
?pfse23 faldo:position ?thisPositionOn26 ;
rdf:type faldo:ExactPosition .
?ligand24 rdfs:subClassOf chebi:23378 .
_:404404 a rdf:Statement ;
up:attribution _:404390 ;
rdf:subject ?this ;
rdf:predicate up:recommendedName ;
rdf:object ?name0 .
_:404405 a rdf:Statement ;
up:attribution _:404391 ;
rdf:subject ?gene1 ;
rdf:predicate up:encodedBy ;
rdf:object ?gene1 .
_:404406 a rdf:Statement ;
up:attribution _:404392 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation2 .
_:404407 a rdf:Statement ;
up:attribution _:404393 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation3 .
_:404408 a rdf:Statement ;
up:attribution _:404394 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation4 .
_:404409 a rdf:Statement ;
up:attribution _:404395 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation6 .
_:404410 a rdf:Statement ;
up:attribution _:404396 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:963 .
_:404411 a rdf:Statement ;
up:attribution _:404397 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0005737 .
_:404412 a rdf:Statement ;
up:attribution _:404398 ;
rdf:subject ?case7 ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:186 .
_:404413 a rdf:Statement ;
up:attribution _:404399 ;
rdf:subject ?case7 ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:479 .
_:404414 a rdf:Statement ;
up:attribution _:404400 ;
rdf:subject ?case7 ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0005507 .
_:404415 a rdf:Statement ;
up:source unirule:MF_01160 ;
rdf:subject ?pfs8 ;
rdf:predicate up:annotation ;
rdf:object ?annotation9 .
_:404416 a rdf:Statement ;
up:attribution _:404401 ;
rdf:subject ?pfs8 ;
rdf:predicate up:annotation ;
rdf:object ?annotation9 .
_:404417 a rdf:Statement ;
up:source unirule:MF_01160 ;
rdf:subject ?pfs8 ;
rdf:predicate up:annotation ;
rdf:object ?annotation15 .
_:404418 a rdf:Statement ;
up:attribution _:404402 ;
rdf:subject ?pfs8 ;
rdf:predicate up:annotation ;
rdf:object ?annotation15 .
_:404419 a rdf:Statement ;
up:source unirule:MF_01160 ;
rdf:subject ?pfs8 ;
rdf:predicate up:annotation ;
rdf:object ?annotation21 .
_:404420 a rdf:Statement ;
up:attribution _:404403 ;
rdf:subject ?pfs8 ;
rdf:predicate up:annotation ;
rdf:object ?annotation21 .
}
WHERE {
#baseURI: http://purl.uniprot.org/unirule/MF_01160
#Rule MF_01160 Created by:? on:2005-02-28 Modified by:Edouard de Castro on:2022-11-19
?this up:organism ?thisOrganism ;
rdfs:seeAlso signature:MF_01160 .
?thisOrganism rdfs:subClassOf+ taxon:91347 .
BIND(URI(CONCAT(STR(?this), '#MF_01160a0')) AS ?name0) .
BIND(URI(CONCAT(STR(?this), '#MF_01160a2')) AS ?annotation2) .
BIND(URI(CONCAT(STR(?this), '#MF_01160a3')) AS ?annotation3) .
BIND(URI(CONCAT(STR(?this), '#MF_01160a4')) AS ?annotation4) .
BIND(URI(CONCAT(STR(?this), '#MF_01160a6')) AS ?annotation6) .
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch31 faldo:location ?templateMotifSequenceMatchRegionP6948832 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP6948834 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarP69488MF_0116027 .
?templateMotifSequenceMatchRegionP6948832 faldo:begin ?templateMotifSequenceMatchBeginP6948833 .
?templateMotifSequenceMatchBeginP6948833 faldo:position ?templateMotifSequenceMatchBeginPositionP6948828 ;
faldo:reference isoform:P69488-1 .
?templateMotifSequenceProfileAlignmentOperationP6948834 edam:has_input signature:MF_01160 ;
rdf:type edam:operation_0300 .
?targetMotifMatch35 faldo:location ?targetMotifMatchRegionMatch36 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_0116038 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarP69488MF_0116029 .
?targetMotifMatchRegionMatch36 faldo:begin ?targetMotifMatchRegionMatchBeginMF_0116037 .
?targetMotifMatchRegionMatchBeginMF_0116037 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0116030 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_0116038 edam:has_input signature:MF_01160 ;
rdf:type edam:operation_0300 .
BIND(?this AS ?tagFTGRP_1) .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP69488MF_0116027, 1, (STRLEN(?templateMotifCigarP69488MF_0116027) - STRLEN(REPLACE(?templateMotifCigarP69488MF_0116027, CONCAT('^(?:-*[^-]){', STR(((16 - ?templateMotifSequenceMatchBeginPositionP6948828) + 1)), '}'), '')))), '[a-z]', '')) AS ?step139) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP69488MF_0116029, 1, (STRLEN(?targetMotifMatchCigarP69488MF_0116029) - STRLEN(REPLACE(?targetMotifMatchCigarP69488MF_0116029, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step139), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP69488MF_0116029, 1, (STRLEN(?targetMotifMatchCigarP69488MF_0116029) - STRLEN(REPLACE(?targetMotifMatchCigarP69488MF_0116029, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step139), '}'), '')))), '[^-]', ''))) AS ?step240) .
BIND(((?step240 + ?targetMotifMatchRegionMatchBeginPositionMF_0116030) - 1) AS ?thisPositionOn13) .
BIND(?thisPositionOn13 AS ?thisPositionOn14) .
BIND(?this AS ?pfs1t41) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn13))) AS ?pfsb10) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn14))) AS ?pfse11) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn13, 1) = 'C')) .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP69488MF_0116027, 1, (STRLEN(?templateMotifCigarP69488MF_0116027) - STRLEN(REPLACE(?templateMotifCigarP69488MF_0116027, CONCAT('^(?:-*[^-]){', STR(((83 - ?templateMotifSequenceMatchBeginPositionP6948828) + 1)), '}'), '')))), '[a-z]', '')) AS ?step142) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP69488MF_0116029, 1, (STRLEN(?targetMotifMatchCigarP69488MF_0116029) - STRLEN(REPLACE(?targetMotifMatchCigarP69488MF_0116029, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step142), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP69488MF_0116029, 1, (STRLEN(?targetMotifMatchCigarP69488MF_0116029) - STRLEN(REPLACE(?targetMotifMatchCigarP69488MF_0116029, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step142), '}'), '')))), '[^-]', ''))) AS ?step243) .
BIND(((?step243 + ?targetMotifMatchRegionMatchBeginPositionMF_0116030) - 1) AS ?thisPositionOn19) .
BIND(?thisPositionOn19 AS ?thisPositionOn20) .
BIND(?this AS ?pfs1t44) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn19))) AS ?pfsb16) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn20))) AS ?pfse17) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn19, 1) = 'H')) .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP69488MF_0116027, 1, (STRLEN(?templateMotifCigarP69488MF_0116027) - STRLEN(REPLACE(?templateMotifCigarP69488MF_0116027, CONCAT('^(?:-*[^-]){', STR(((84 - ?templateMotifSequenceMatchBeginPositionP6948828) + 1)), '}'), '')))), '[a-z]', '')) AS ?step145) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP69488MF_0116029, 1, (STRLEN(?targetMotifMatchCigarP69488MF_0116029) - STRLEN(REPLACE(?targetMotifMatchCigarP69488MF_0116029, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step145), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP69488MF_0116029, 1, (STRLEN(?targetMotifMatchCigarP69488MF_0116029) - STRLEN(REPLACE(?targetMotifMatchCigarP69488MF_0116029, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step145), '}'), '')))), '[^-]', ''))) AS ?step246) .
BIND(((?step246 + ?targetMotifMatchRegionMatchBeginPositionMF_0116030) - 1) AS ?thisPositionOn25) .
BIND(?thisPositionOn25 AS ?thisPositionOn26) .
BIND(?this AS ?pfs1t47) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn25))) AS ?pfsb22) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn26))) AS ?pfse23) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn25, 1) = 'H')) .
BIND(?this AS ?pfs8) .
}
OPTIONAL {
?this a up:Protein .
BIND(?this AS ?caseWithTag48) .
}
BIND(IF(BOUND(?tagFTGRP_1), ?caseWithTag48, ?UNBOUND_VARIABLE) AS ?case7) .
}
"xsd:string |
