| http://purl.uniprot.org/unirules/MF_01171#construct | http://www.w3.org/ns/shacl#construct | "CONSTRUCT {
_:409740 up:source unirule:MF_01171 .
_:409741 up:source unirule:MF_01171 .
_:409742 up:source unirule:MF_01171 .
_:409743 up:source unirule:MF_01171 .
_:409744 up:source unirule:MF_01171 .
_:409745 up:source unirule:MF_01171 .
_:409746 up:source unirule:MF_01171 .
_:409747 up:source unirule:MF_01171 .
_:409748 up:source unirule:MF_01171 .
_:409749 up:source unirule:MF_01171 .
_:409750 up:source unirule:MF_01171 .
_:409751 up:source unirule:MF_01171 .
_:409752 up:source unirule:MF_01171 .
_:409753 up:source unirule:MF_01171 .
_:409754 up:source unirule:MF_01171 .
?this up:alternativeName ?name1 ;
up:annotation ?annotation3 ,
?annotation4 ,
?annotation6 ,
?annotation7 ;
up:classifiedWith GO:0008791 ,
GO:0019544 ,
GO:0019545 ,
keyword:12 ,
keyword:56 ,
keyword:808 ;
up:recommendedName ?name0 .
?name0 up:ecName '2.3.1.109' ;
up:fullName 'Arginine N-succinyltransferase' ;
up:shortName 'AST' ;
rdf:type up:Structured_Name .
?name1 up:fullName 'AOST' ;
rdf:type up:Structured_Name .
?gene2 skos:prefLabel 'astA' .
?annotation3 a up:Function_Annotation ;
rdfs:comment 'Catalyzes the transfer of succinyl-CoA to arginine to produce N(2)-succinylarginine.' .
?annotation4 up:activity ?activity5 ;
rdf:type up:Catalytic_Activity_Annotation .
?activity5 up:catalyticActivity ;
up:enzymeClass .
?annotation6 a up:Pathway_Annotation ;
rdfs:comment 'Amino-acid degradation; L-arginine degradation via AST pathway; L-glutamate and succinate from L-arginine: step 1/5.' .
?annotation7 a up:Similarity_Annotation ;
rdfs:comment 'Belongs to the arginine N-succinyltransferase family.' .
?pfs8 up:annotation ?annotation9 .
?annotation9 faldo:begin ?pfsb10 ;
faldo:end ?pfse11 ;
rdf:type up:Active_Site_Annotation ;
rdfs:comment 'Proton donor' .
?pfsb10 faldo:position ?thisPositionOn12 ;
rdf:type faldo:ExactPosition .
?pfse11 faldo:position ?thisPositionOn13 ;
rdf:type faldo:ExactPosition .
?pfs14 up:annotation ?annotation15 .
?annotation15 faldo:begin ?pfsb16 ;
faldo:end ?pfse17 ;
up:ligand ?ligand18 ;
rdf:type up:Binding_Site_Annotation .
?pfsb16 faldo:position ?thisPositionOn19 ;
rdf:type faldo:ExactPosition .
?pfse17 faldo:position ?thisPositionOn20 ;
rdf:type faldo:ExactPosition .
?ligand18 rdfs:subClassOf chebi:57292 .
_:409755 a rdf:Statement ;
up:attribution _:409740 ;
rdf:subject ?this ;
rdf:predicate up:recommendedName ;
rdf:object ?name0 .
_:409756 a rdf:Statement ;
up:attribution _:409741 ;
rdf:subject ?this ;
rdf:predicate up:alternativeName ;
rdf:object ?name1 .
_:409757 a rdf:Statement ;
up:attribution _:409742 ;
rdf:subject ?gene2 ;
rdf:predicate up:encodedBy ;
rdf:object ?gene2 .
_:409758 a rdf:Statement ;
up:attribution _:409743 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation3 .
_:409759 a rdf:Statement ;
up:attribution _:409744 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation4 .
_:409760 a rdf:Statement ;
up:attribution _:409745 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation6 .
_:409761 a rdf:Statement ;
up:attribution _:409746 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation7 .
_:409762 a rdf:Statement ;
up:attribution _:409747 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:12 .
_:409763 a rdf:Statement ;
up:attribution _:409748 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:56 .
_:409764 a rdf:Statement ;
up:attribution _:409749 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:808 .
_:409765 a rdf:Statement ;
up:attribution _:409750 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0008791 .
_:409766 a rdf:Statement ;
up:attribution _:409751 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0019544 .
_:409767 a rdf:Statement ;
up:attribution _:409752 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0019545 .
_:409768 a rdf:Statement ;
up:source unirule:MF_01171 ;
rdf:subject ?pfs8 ;
rdf:predicate up:annotation ;
rdf:object ?annotation9 .
_:409769 a rdf:Statement ;
up:attribution _:409753 ;
rdf:subject ?pfs8 ;
rdf:predicate up:annotation ;
rdf:object ?annotation9 .
_:409770 a rdf:Statement ;
up:source unirule:MF_01171 ;
rdf:subject ?pfs14 ;
rdf:predicate up:annotation ;
rdf:object ?annotation15 .
_:409771 a rdf:Statement ;
up:attribution _:409754 ;
rdf:subject ?pfs14 ;
rdf:predicate up:annotation ;
rdf:object ?annotation15 .
}
WHERE {
#baseURI: http://purl.uniprot.org/unirule/MF_01171
#Rule MF_01171 Created by:? on:2006-11-06 Modified by:Catherine Rivoire on:2025-09-18
?this up:organism ?thisOrganism ;
rdfs:seeAlso signature:MF_01171 .
?thisOrganism rdfs:subClassOf+ taxon:91347 .
BIND(URI(CONCAT(STR(?this), '#MF_01171a0')) AS ?name0) .
BIND(URI(CONCAT(STR(?this), '#MF_01171a1')) AS ?name1) .
BIND(URI(CONCAT(STR(?this), '#MF_01171a3')) AS ?annotation3) .
BIND(URI(CONCAT(STR(?this), '#MF_01171a4')) AS ?annotation4) .
BIND(URI(CONCAT(STR(?this), '#MF_01171a6')) AS ?annotation6) .
BIND(URI(CONCAT(STR(?this), '#MF_01171a7')) AS ?annotation7) .
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch25 faldo:location ?templateMotifSequenceMatchRegionP0AE3726 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0AE3728 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarP0AE37MF_0117121 .
?templateMotifSequenceMatchRegionP0AE3726 faldo:begin ?templateMotifSequenceMatchBeginP0AE3727 .
?templateMotifSequenceMatchBeginP0AE3727 faldo:position ?templateMotifSequenceMatchBeginPositionP0AE3722 ;
faldo:reference isoform:P0AE37-1 .
?templateMotifSequenceProfileAlignmentOperationP0AE3728 edam:has_input signature:MF_01171 ;
rdf:type edam:operation_0300 .
?targetMotifMatch29 faldo:location ?targetMotifMatchRegionMatch30 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_0117132 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarP0AE37MF_0117123 .
?targetMotifMatchRegionMatch30 faldo:begin ?targetMotifMatchRegionMatchBeginMF_0117131 .
?targetMotifMatchRegionMatchBeginMF_0117131 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0117124 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_0117132 edam:has_input signature:MF_01171 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0AE37MF_0117121, 1, (STRLEN(?templateMotifCigarP0AE37MF_0117121) - STRLEN(REPLACE(?templateMotifCigarP0AE37MF_0117121, CONCAT('^(?:-*[^-]){', STR(((229 - ?templateMotifSequenceMatchBeginPositionP0AE3722) + 1)), '}'), '')))), '[a-z]', '')) AS ?step133) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0AE37MF_0117123, 1, (STRLEN(?targetMotifMatchCigarP0AE37MF_0117123) - STRLEN(REPLACE(?targetMotifMatchCigarP0AE37MF_0117123, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step133), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0AE37MF_0117123, 1, (STRLEN(?targetMotifMatchCigarP0AE37MF_0117123) - STRLEN(REPLACE(?targetMotifMatchCigarP0AE37MF_0117123, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step133), '}'), '')))), '[^-]', ''))) AS ?step234) .
BIND(((?step234 + ?targetMotifMatchRegionMatchBeginPositionMF_0117124) - 1) AS ?thisPositionOn12) .
BIND(?thisPositionOn12 AS ?thisPositionOn13) .
BIND(?this AS ?pfs1t35) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn12))) AS ?pfsb10) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn13))) AS ?pfse11) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn12, 1) = 'H')) .
BIND(URI(CONCAT(STR(?this), '#MF_01171a9')) AS ?annotation9) .
BIND(?this AS ?pfs8) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch40 faldo:location ?templateMotifSequenceMatchRegionP0AE3741 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0AE3743 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarP0AE37MF_0117136 .
?templateMotifSequenceMatchRegionP0AE3741 faldo:begin ?templateMotifSequenceMatchBeginP0AE3742 .
?templateMotifSequenceMatchBeginP0AE3742 faldo:position ?templateMotifSequenceMatchBeginPositionP0AE3737 ;
faldo:reference isoform:P0AE37-1 .
?templateMotifSequenceProfileAlignmentOperationP0AE3743 edam:has_input signature:MF_01171 ;
rdf:type edam:operation_0300 .
?targetMotifMatch44 faldo:location ?targetMotifMatchRegionMatch45 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_0117147 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarP0AE37MF_0117138 .
?targetMotifMatchRegionMatch45 faldo:begin ?targetMotifMatchRegionMatchBeginMF_0117146 .
?targetMotifMatchRegionMatchBeginMF_0117146 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0117139 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_0117147 edam:has_input signature:MF_01171 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0AE37MF_0117136, 1, (STRLEN(?templateMotifCigarP0AE37MF_0117136) - STRLEN(REPLACE(?templateMotifCigarP0AE37MF_0117136, CONCAT('^(?:-*[^-]){', STR(((125 - ?templateMotifSequenceMatchBeginPositionP0AE3737) + 1)), '}'), '')))), '[a-z]', '')) AS ?step148) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0AE37MF_0117138, 1, (STRLEN(?targetMotifMatchCigarP0AE37MF_0117138) - STRLEN(REPLACE(?targetMotifMatchCigarP0AE37MF_0117138, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step148), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0AE37MF_0117138, 1, (STRLEN(?targetMotifMatchCigarP0AE37MF_0117138) - STRLEN(REPLACE(?targetMotifMatchCigarP0AE37MF_0117138, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step148), '}'), '')))), '[^-]', ''))) AS ?step249) .
BIND(((?step249 + ?targetMotifMatchRegionMatchBeginPositionMF_0117139) - 1) AS ?thisPositionOn19) .
BIND(?thisPositionOn19 AS ?thisPositionOn20) .
BIND(?this AS ?pfs1t50) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn19))) AS ?pfsb16) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn20))) AS ?pfse17) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn19, 1) = 'L')) .
BIND(URI(CONCAT(STR(?this), '#MF_01171a15')) AS ?annotation15) .
BIND(?this AS ?pfs14) .
}
}
"xsd:string |
