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| Subject | Predicate | Object |
|---|---|---|
| http://purl.uniprot.org/unirules/MF_01176#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01176#construct-template-64 |
| http://purl.uniprot.org/unirules/MF_01176#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01176#construct-template-88 |
| http://purl.uniprot.org/unirules/MF_01176#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01176#construct-template-63 |
| http://purl.uniprot.org/unirules/MF_01176#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01176#construct-template-87 |
| http://purl.uniprot.org/unirules/MF_01176#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01176#construct-template-62 |
| http://purl.uniprot.org/unirules/MF_01176#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01176#construct-template-86 |
| http://purl.uniprot.org/unirules/MF_01176#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01176#construct-template-61 |
| http://purl.uniprot.org/unirules/MF_01176#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01176#construct-template-85 |
| http://purl.uniprot.org/unirules/MF_01176#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01176#construct-template-39 |
| http://purl.uniprot.org/unirules/MF_01176#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01176#construct-template-38 |
| http://purl.uniprot.org/unirules/MF_01176#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01176#construct-template-37 |
| http://purl.uniprot.org/unirules/MF_01176#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01176#construct-template-36 |
| http://purl.uniprot.org/unirules/MF_01176#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01176#construct-template-35 |
| http://purl.uniprot.org/unirules/MF_01176#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01176#construct-template-59 |
| http://purl.uniprot.org/unirules/MF_01176#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01176#construct-template-34 |
| http://purl.uniprot.org/unirules/MF_01176#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01176#construct-template-58 |
| http://purl.uniprot.org/unirules/MF_01176#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01176#construct-template-33 |
| http://purl.uniprot.org/unirules/MF_01176#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01176#construct-template-57 |
| http://purl.uniprot.org/unirules/MF_01176#construct | http://www.w3.org/ns/shacl#prefixes | http://purl.uniprot.org/unirules/ |
| http://purl.uniprot.org/unirules/MF_01176#construct | http://spinrdf.org/sp#where | http://purl.uniprot.org/unirules/MF_01176#construct-where-list-0 |
| http://purl.uniprot.org/unirules/MF_01176#construct | http://spinrdf.org/sp#templates | http://purl.uniprot.org/unirules/MF_01176#construct-template-list-0 |
| http://purl.uniprot.org/unirules/MF_01176#construct | http://www.w3.org/ns/shacl#construct | "CONSTRUCT { _:411413 up:source unirule:MF_01176 . _:411414 up:source unirule:MF_01176 . _:411415 up:source unirule:MF_01176 . _:411416 up:source unirule:MF_01176 . _:411417 up:source unirule:MF_01176 . _:411418 up:source unirule:MF_01176 . _:411419 up:source unirule:MF_01176 . _:411420 up:source unirule:MF_01176 . _:411421 up:source unirule:MF_01176 . _:411422 up:source unirule:MF_01176 . _:411423 up:source unirule:MF_01176 . _:411424 up:source unirule:MF_01176 . _:411425 up:source unirule:MF_01176 . _:411426 up:source unirule:MF_01176 . _:411427 up:source unirule:MF_01176 . _:411428 up:source unirule:MF_01176 . _:411429 up:source unirule:MF_01176 . _:411430 up:source unirule:MF_01176 . _:411431 up:source unirule:MF_01176 . ?this up:annotation ?annotation2 ; up:classifiedWith GO:0003690 , GO:0003700 , GO:0006355 , keyword:10 , keyword:238 , keyword:678 , keyword:804 , keyword:805 ; up:recommendedName ?name0 . ?name0 up:fullName 'HTH-type transcriptional regulator IscR' ; rdf:type up:Structured_Name . ?gene1 skos:prefLabel 'iscR' . ?annotation2 a up:Function_Annotation ; rdfs:comment 'Regulates the transcription of several operons and genes involved in the biogenesis of Fe-S clusters and Fe-S-containing proteins.' . ?case3 up:classifiedWith GO:0005506 , keyword:1 , keyword:408 , keyword:411 , keyword:479 . ?pfs4 up:annotation ?annotation5 , ?annotation11 , ?annotation17 . ?annotation5 faldo:begin ?pfsb6 ; faldo:end ?pfse7 ; up:ligand ?ligand8 ; rdf:type up:Binding_Site_Annotation . ?pfsb6 faldo:position ?thisPositionOn9 ; rdf:type faldo:ExactPosition . ?pfse7 faldo:position ?thisPositionOn10 ; rdf:type faldo:ExactPosition . ?ligand8 rdfs:subClassOf chebi:190135 . ?annotation11 faldo:begin ?pfsb12 ; faldo:end ?pfse13 ; up:ligand ?ligand14 ; rdf:type up:Binding_Site_Annotation . ?pfsb12 faldo:position ?thisPositionOn15 ; rdf:type faldo:ExactPosition . ?pfse13 faldo:position ?thisPositionOn16 ; rdf:type faldo:ExactPosition . ?ligand14 rdfs:subClassOf chebi:190135 . ?annotation17 faldo:begin ?pfsb18 ; faldo:end ?pfse19 ; up:ligand ?ligand20 ; rdf:type up:Binding_Site_Annotation . ?pfsb18 faldo:position ?thisPositionOn21 ; rdf:type faldo:ExactPosition . ?pfse19 faldo:position ?thisPositionOn22 ; rdf:type faldo:ExactPosition . ?ligand20 rdfs:subClassOf chebi:190135 . _:411432 a rdf:Statement ; up:attribution _:411413 ; rdf:subject ?this ; rdf:predicate up:recommendedName ; rdf:object ?name0 . _:411433 a rdf:Statement ; up:attribution _:411414 ; rdf:subject ?gene1 ; rdf:predicate up:encodedBy ; rdf:object ?gene1 . _:411434 a rdf:Statement ; up:attribution _:411415 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation2 . _:411435 a rdf:Statement ; up:attribution _:411416 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:10 . _:411436 a rdf:Statement ; up:attribution _:411417 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:238 . _:411437 a rdf:Statement ; up:attribution _:411418 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:678 . _:411438 a rdf:Statement ; up:attribution _:411419 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:804 . _:411439 a rdf:Statement ; up:attribution _:411420 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:805 . _:411440 a rdf:Statement ; up:attribution _:411421 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0003690 . _:411441 a rdf:Statement ; up:attribution _:411422 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0003700 . _:411442 a rdf:Statement ; up:attribution _:411423 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0006355 . _:411443 a rdf:Statement ; up:attribution _:411424 ; rdf:subject ?case3 ; rdf:predicate up:classifiedWith ; rdf:object keyword:1 . _:411444 a rdf:Statement ; up:attribution _:411425 ; rdf:subject ?case3 ; rdf:predicate up:classifiedWith ; rdf:object keyword:408 . _:411445 a rdf:Statement ; up:attribution _:411426 ; rdf:subject ?case3 ; rdf:predicate up:classifiedWith ; rdf:object keyword:411 . _:411446 a rdf:Statement ; up:attribution _:411427 ; rdf:subject ?case3 ; rdf:predicate up:classifiedWith ; rdf:object keyword:479 . _:411447 a rdf:Statement ; up:attribution _:411428 ; rdf:subject ?case3 ; rdf:predicate up:classifiedWith ; rdf:object GO:0005506 . _:411448 a rdf:Statement ; up:source unirule:MF_01176 ; rdf:subject ?pfs4 ; rdf:predicate up:annotation ; rdf:object ?annotation5 . _:411449 a rdf:Statement ; up:attribution _:411429 ; rdf:subject ?pfs4 ; rdf:predicate up:annotation ; rdf:object ?annotation5 . _:411450 a rdf:Statement ; up:source unirule:MF_01176 ; rdf:subject ?pfs4 ; rdf:predicate up:annotation ; rdf:object ?annotation11 . _:411451 a rdf:Statement ; up:attribution _:411430 ; rdf:subject ?pfs4 ; rdf:predicate up:annotation ; rdf:object ?annotation11 . _:411452 a rdf:Statement ; up:source unirule:MF_01176 ; rdf:subject ?pfs4 ; rdf:predicate up:annotation ; rdf:object ?annotation17 . _:411453 a rdf:Statement ; up:attribution _:411431 ; rdf:subject ?pfs4 ; rdf:predicate up:annotation ; rdf:object ?annotation17 . } WHERE { #baseURI: http://purl.uniprot.org/unirule/MF_01176 #Rule MF_01176 Created by:? on:2006-11-23 Modified by:Edouard de Castro on:2023-06-01 ?this up:organism ?thisOrganism ; rdfs:seeAlso signature:MF_01176 . ?thisOrganism rdfs:subClassOf+ taxon:1236 . BIND(URI(CONCAT(STR(?this), '#MF_01176a0')) AS ?name0) . BIND(URI(CONCAT(STR(?this), '#MF_01176a2')) AS ?annotation2) . OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch27 faldo:location ?templateMotifSequenceMatchRegionP0AGK828 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0AGK830 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP0AGK8MF_0117623 . ?templateMotifSequenceMatchRegionP0AGK828 faldo:begin ?templateMotifSequenceMatchBeginP0AGK829 . ?templateMotifSequenceMatchBeginP0AGK829 faldo:position ?templateMotifSequenceMatchBeginPositionP0AGK824 ; faldo:reference isoform:P0AGK8-1 . ?templateMotifSequenceProfileAlignmentOperationP0AGK830 edam:has_input signature:MF_01176 ; rdf:type edam:operation_0300 . ?targetMotifMatch31 faldo:location ?targetMotifMatchRegionMatch32 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_0117634 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP0AGK8MF_0117625 . ?targetMotifMatchRegionMatch32 faldo:begin ?targetMotifMatchRegionMatchBeginMF_0117633 . ?targetMotifMatchRegionMatchBeginMF_0117633 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0117626 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_0117634 edam:has_input signature:MF_01176 ; rdf:type edam:operation_0300 . BIND(?this AS ?tagFTGRP_1) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0AGK8MF_0117623, 1, (STRLEN(?templateMotifCigarP0AGK8MF_0117623) - STRLEN(REPLACE(?templateMotifCigarP0AGK8MF_0117623, CONCAT('^(?:-*[^-]){', STR(((92 - ?templateMotifSequenceMatchBeginPositionP0AGK824) + 1)), '}'), '')))), '[a-z]', '')) AS ?step135) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0AGK8MF_0117625, 1, (STRLEN(?targetMotifMatchCigarP0AGK8MF_0117625) - STRLEN(REPLACE(?targetMotifMatchCigarP0AGK8MF_0117625, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step135), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0AGK8MF_0117625, 1, (STRLEN(?targetMotifMatchCigarP0AGK8MF_0117625) - STRLEN(REPLACE(?targetMotifMatchCigarP0AGK8MF_0117625, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step135), '}'), '')))), '[^-]', ''))) AS ?step236) . BIND(((?step236 + ?targetMotifMatchRegionMatchBeginPositionMF_0117626) - 1) AS ?thisPositionOn9) . BIND(?thisPositionOn9 AS ?thisPositionOn10) . BIND(?this AS ?pfs1t37) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn9))) AS ?pfsb6) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn10))) AS ?pfse7) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn9, 1) = 'C')) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0AGK8MF_0117623, 1, (STRLEN(?templateMotifCigarP0AGK8MF_0117623) - STRLEN(REPLACE(?templateMotifCigarP0AGK8MF_0117623, CONCAT('^(?:-*[^-]){', STR(((98 - ?templateMotifSequenceMatchBeginPositionP0AGK824) + 1)), '}'), '')))), '[a-z]', '')) AS ?step138) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0AGK8MF_0117625, 1, (STRLEN(?targetMotifMatchCigarP0AGK8MF_0117625) - STRLEN(REPLACE(?targetMotifMatchCigarP0AGK8MF_0117625, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step138), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0AGK8MF_0117625, 1, (STRLEN(?targetMotifMatchCigarP0AGK8MF_0117625) - STRLEN(REPLACE(?targetMotifMatchCigarP0AGK8MF_0117625, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step138), '}'), '')))), '[^-]', ''))) AS ?step239) . BIND(((?step239 + ?targetMotifMatchRegionMatchBeginPositionMF_0117626) - 1) AS ?thisPositionOn15) . BIND(?thisPositionOn15 AS ?thisPositionOn16) . BIND(?this AS ?pfs1t40) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn15))) AS ?pfsb12) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn16))) AS ?pfse13) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn15, 1) = 'C')) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0AGK8MF_0117623, 1, (STRLEN(?templateMotifCigarP0AGK8MF_0117623) - STRLEN(REPLACE(?templateMotifCigarP0AGK8MF_0117623, CONCAT('^(?:-*[^-]){', STR(((104 - ?templateMotifSequenceMatchBeginPositionP0AGK824) + 1)), '}'), '')))), '[a-z]', '')) AS ?step141) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0AGK8MF_0117625, 1, (STRLEN(?targetMotifMatchCigarP0AGK8MF_0117625) - STRLEN(REPLACE(?targetMotifMatchCigarP0AGK8MF_0117625, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step141), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0AGK8MF_0117625, 1, (STRLEN(?targetMotifMatchCigarP0AGK8MF_0117625) - STRLEN(REPLACE(?targetMotifMatchCigarP0AGK8MF_0117625, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step141), '}'), '')))), '[^-]', ''))) AS ?step242) . BIND(((?step242 + ?targetMotifMatchRegionMatchBeginPositionMF_0117626) - 1) AS ?thisPositionOn21) . BIND(?thisPositionOn21 AS ?thisPositionOn22) . BIND(?this AS ?pfs1t43) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn21))) AS ?pfsb18) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn22))) AS ?pfse19) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn21, 1) = 'C')) . BIND(?this AS ?pfs4) . } OPTIONAL { ?this a up:Protein . BIND(?this AS ?caseWithTag44) . } BIND(IF(BOUND(?tagFTGRP_1), ?caseWithTag44, ?UNBOUND_VARIABLE) AS ?case3) . } "xsd:string |
| http://purl.uniprot.org/unirules/MF_01176 | http://www.w3.org/ns/shacl#rule | http://purl.uniprot.org/unirules/MF_01176#construct |