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http://purl.uniprot.org/unirules/MF_01314#constructhttp://spinrdf.org/sp#wherehttp://purl.uniprot.org/unirules/MF_01314#construct-where-list-0
http://purl.uniprot.org/unirules/MF_01314#constructhttp://spinrdf.org/sp#templateshttp://purl.uniprot.org/unirules/MF_01314#construct-template-list-0
http://purl.uniprot.org/unirules/MF_01314#constructhttp://www.w3.org/ns/shacl#construct"CONSTRUCT { _:471359 up:source unirule:MF_01314 . _:471360 up:source unirule:MF_01314 . _:471361 up:source unirule:MF_01314 . _:471362 up:source unirule:MF_01314 . _:471363 up:source unirule:MF_01314 . _:471364 up:source unirule:MF_01314 . _:471365 up:source unirule:MF_01314 . _:471366 up:source unirule:MF_01314 . _:471367 up:source unirule:MF_01314 . _:471368 up:source unirule:MF_01314 . _:471369 up:source unirule:MF_01314 . _:471370 up:source unirule:MF_01314 . _:471371 up:source unirule:MF_01314 . _:471372 up:source unirule:MF_01314 . _:471373 up:source unirule:MF_01314 . _:471374 up:source unirule:MF_01314 . ?this up:annotation ?annotation2 , ?annotation3 ; up:classifiedWith GO:0000160 , GO:0003700 , GO:0005524 , GO:0006355 , keyword:238 , keyword:547 , keyword:67 , keyword:804 , keyword:805 ; up:recommendedName ?name0 . ?name0 up:fullName 'Anaerobic nitric oxide reductase transcription regulator NorR' ; rdf:type up:Structured_Name . ?gene1 skos:prefLabel 'norR' . ?annotation2 a up:Function_Annotation ; rdfs:comment 'Required for the expression of anaerobic nitric oxide (NO) reductase, acts as a transcriptional activator for at least the norVW operon. Activation also requires sigma-54.' . ?annotation3 a up:Pathway_Annotation ; rdfs:comment 'Nitrogen metabolism; nitric oxide reduction.' . ?case4 up:classifiedWith keyword:597 . ?pfs5 up:annotation ?annotation6 . ?annotation6 faldo:begin ?pfsb7 ; faldo:end ?pfse8 ; rdf:type up:Modified_Residue_Annotation ; rdfs:comment '4-aspartylphosphate' . ?pfsb7 faldo:position ?thisPositionOn9 ; rdf:type faldo:ExactPosition . ?pfse8 faldo:position ?thisPositionOn10 ; rdf:type faldo:ExactPosition . ?pfs11 up:annotation ?annotation12 . ?annotation12 faldo:begin ?pfsb13 ; faldo:end ?pfse14 ; rdf:type up:Nucleotide_Binding_Annotation ; rdfs:comment 'H-T-H motif' . ?pfsb13 faldo:position ?thisPositionOn15 ; rdf:type faldo:ExactPosition . ?pfse14 faldo:position ?thisPositionOn16 ; rdf:type faldo:ExactPosition . _:471375 a rdf:Statement ; up:attribution _:471359 ; rdf:subject ?this ; rdf:predicate up:recommendedName ; rdf:object ?name0 . _:471376 a rdf:Statement ; up:attribution _:471360 ; rdf:subject ?gene1 ; rdf:predicate up:encodedBy ; rdf:object ?gene1 . _:471377 a rdf:Statement ; up:attribution _:471361 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation2 . _:471378 a rdf:Statement ; up:attribution _:471362 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation3 . _:471379 a rdf:Statement ; up:attribution _:471363 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:804 . _:471380 a rdf:Statement ; up:attribution _:471364 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:805 . _:471381 a rdf:Statement ; up:attribution _:471365 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:67 . _:471382 a rdf:Statement ; up:attribution _:471366 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:547 . _:471383 a rdf:Statement ; up:attribution _:471367 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:238 . _:471384 a rdf:Statement ; up:attribution _:471368 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0005524 . _:471385 a rdf:Statement ; up:attribution _:471369 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0003700 . _:471386 a rdf:Statement ; up:attribution _:471370 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0006355 . _:471387 a rdf:Statement ; up:attribution _:471371 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0000160 . _:471388 a rdf:Statement ; up:attribution _:471372 ; rdf:subject ?case4 ; rdf:predicate up:classifiedWith ; rdf:object keyword:597 . _:471389 a rdf:Statement ; up:source unirule:MF_01314 ; rdf:subject ?pfs5 ; rdf:predicate up:annotation ; rdf:object ?annotation6 . _:471390 a rdf:Statement ; up:attribution _:471373 ; rdf:subject ?pfs5 ; rdf:predicate up:annotation ; rdf:object ?annotation6 . _:471391 a rdf:Statement ; up:source unirule:MF_01314 ; rdf:subject ?pfs11 ; rdf:predicate up:annotation ; rdf:object ?annotation12 . _:471392 a rdf:Statement ; up:attribution _:471374 ; rdf:subject ?pfs11 ; rdf:predicate up:annotation ; rdf:object ?annotation12 . } WHERE { #baseURI: http://purl.uniprot.org/unirule/MF_01314 #Rule MF_01314 Created by:? on:2005-02-28 Modified by:Catherine Rivoire on:2022-06-28 VALUES ?supertaxon17 {taxon:642 taxon:511678 taxon:544 taxon:561 taxon:547 taxon:570 taxon:122277 taxon:590 taxon:2985502 taxon:620 taxon:662} ?this up:organism ?thisOrganism ; rdfs:seeAlso signature:MF_01314 . ?thisOrganism rdfs:subClassOf+ ?supertaxon17 . BIND(URI(CONCAT(STR(?this), '#MF_01314a0')) AS ?name0) . BIND(URI(CONCAT(STR(?this), '#MF_01314a2')) AS ?annotation2) . BIND(URI(CONCAT(STR(?this), '#MF_01314a3')) AS ?annotation3) . OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch22 faldo:location ?templateMotifSequenceMatchRegionP3701323 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP3701325 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP37013MF_0131418 . ?templateMotifSequenceMatchRegionP3701323 faldo:begin ?templateMotifSequenceMatchBeginP3701324 . ?templateMotifSequenceMatchBeginP3701324 faldo:position ?templateMotifSequenceMatchBeginPositionP3701319 ; faldo:reference isoform:P37013-1 . ?templateMotifSequenceProfileAlignmentOperationP3701325 edam:has_input signature:MF_01314 ; rdf:type edam:operation_0300 . ?targetMotifMatch26 faldo:location ?targetMotifMatchRegionMatch27 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_0131429 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP37013MF_0131420 . ?targetMotifMatchRegionMatch27 faldo:begin ?targetMotifMatchRegionMatchBeginMF_0131428 . ?targetMotifMatchRegionMatchBeginMF_0131428 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0131421 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_0131429 edam:has_input signature:MF_01314 ; rdf:type edam:operation_0300 . BIND(?this AS ?tagFT_2) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP37013MF_0131418, 1, (STRLEN(?templateMotifCigarP37013MF_0131418) - STRLEN(REPLACE(?templateMotifCigarP37013MF_0131418, CONCAT('^(?:-*[^-]){', STR(((57 - ?templateMotifSequenceMatchBeginPositionP3701319) + 1)), '}'), '')))), '[a-z]', '')) AS ?step130) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP37013MF_0131420, 1, (STRLEN(?targetMotifMatchCigarP37013MF_0131420) - STRLEN(REPLACE(?targetMotifMatchCigarP37013MF_0131420, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step130), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP37013MF_0131420, 1, (STRLEN(?targetMotifMatchCigarP37013MF_0131420) - STRLEN(REPLACE(?targetMotifMatchCigarP37013MF_0131420, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step130), '}'), '')))), '[^-]', ''))) AS ?step231) . BIND(((?step231 + ?targetMotifMatchRegionMatchBeginPositionMF_0131421) - 1) AS ?thisPositionOn9) . BIND(?thisPositionOn9 AS ?thisPositionOn10) . BIND(?this AS ?pfs1t32) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn9))) AS ?pfsb7) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn10))) AS ?pfse8) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn9, 1) = 'D')) . BIND(URI(CONCAT(STR(?this), '#MF_01314a6')) AS ?annotation6) . BIND(?this AS ?pfs5) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch37 faldo:location ?templateMotifSequenceMatchRegionP3701338 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP3701340 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP37013MF_0131433 . ?templateMotifSequenceMatchRegionP3701338 faldo:begin ?templateMotifSequenceMatchBeginP3701339 . ?templateMotifSequenceMatchBeginP3701339 faldo:position ?templateMotifSequenceMatchBeginPositionP3701334 ; faldo:reference isoform:P37013-1 . ?templateMotifSequenceProfileAlignmentOperationP3701340 edam:has_input signature:MF_01314 ; rdf:type edam:operation_0300 . ?targetMotifMatch41 faldo:location ?targetMotifMatchRegionMatch42 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_0131444 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP37013MF_0131435 . ?targetMotifMatchRegionMatch42 faldo:begin ?targetMotifMatchRegionMatchBeginMF_0131443 . ?targetMotifMatchRegionMatchBeginMF_0131443 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0131436 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_0131444 edam:has_input signature:MF_01314 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP37013MF_0131433, 1, (STRLEN(?templateMotifCigarP37013MF_0131433) - STRLEN(REPLACE(?templateMotifCigarP37013MF_0131433, CONCAT('^(?:-*[^-]){', STR(((479 - ?templateMotifSequenceMatchBeginPositionP3701334) + 1)), '}'), '')))), '[a-z]', '')) AS ?step145) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP37013MF_0131435, 1, (STRLEN(?targetMotifMatchCigarP37013MF_0131435) - STRLEN(REPLACE(?targetMotifMatchCigarP37013MF_0131435, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step145), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP37013MF_0131435, 1, (STRLEN(?targetMotifMatchCigarP37013MF_0131435) - STRLEN(REPLACE(?targetMotifMatchCigarP37013MF_0131435, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step145), '}'), '')))), '[^-]', ''))) AS ?step246) . BIND(((?step246 + ?targetMotifMatchRegionMatchBeginPositionMF_0131436) - 1) AS ?thisPositionOn15) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP37013MF_0131433, 1, (STRLEN(?templateMotifCigarP37013MF_0131433) - STRLEN(REPLACE(?templateMotifCigarP37013MF_0131433, CONCAT('^(?:-*[^-]){', STR(((498 - ?templateMotifSequenceMatchBeginPositionP3701334) + 1)), '}'), '')))), '[a-z]', '')) AS ?step147) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP37013MF_0131435, 1, (STRLEN(?targetMotifMatchCigarP37013MF_0131435) - STRLEN(REPLACE(?targetMotifMatchCigarP37013MF_0131435, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step147), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP37013MF_0131435, 1, (STRLEN(?targetMotifMatchCigarP37013MF_0131435) - STRLEN(REPLACE(?targetMotifMatchCigarP37013MF_0131435, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step147), '}'), '')))), '[^-]', ''))) AS ?step248) . BIND(((?step248 + ?targetMotifMatchRegionMatchBeginPositionMF_0131436) - 1) AS ?thisPositionOn16) . BIND(?this AS ?pfs2t49) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn15))) AS ?pfsb13) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn16))) AS ?pfse14) . FILTER ((BOUND(?thisPositionOn15) && BOUND(?thisPositionOn16))) . BIND(URI(CONCAT(STR(?this), '#MF_01314a12')) AS ?annotation12) . BIND(?this AS ?pfs11) . } OPTIONAL { ?this a up:Protein . BIND(?this AS ?caseWithTag50) . } BIND(IF(BOUND(?tagFT_2), ?caseWithTag50, ?UNBOUND_VARIABLE) AS ?case4) . } "xsd:string
http://purl.uniprot.org/unirules/MF_01314http://www.w3.org/ns/shacl#rulehttp://purl.uniprot.org/unirules/MF_01314#construct
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