| http://purl.uniprot.org/unirules/MF_01376#construct | http://www.w3.org/ns/shacl#construct | "CONSTRUCT {
_:495225 up:source unirule:MF_01376 .
_:495226 up:source unirule:MF_01376 .
_:495227 up:source unirule:MF_01376 .
_:495228 up:source unirule:MF_01376 .
_:495229 up:source unirule:MF_01376 .
_:495230 up:source unirule:MF_01376 .
_:495231 up:source unirule:MF_01376 .
_:495232 up:source unirule:MF_01376 .
_:495233 up:source unirule:MF_01376 .
_:495234 up:source unirule:MF_01376 .
_:495235 up:source unirule:MF_01376 .
_:495236 up:source unirule:MF_01376 .
_:495237 up:source unirule:MF_01376 .
_:495238 up:source unirule:MF_01376 .
_:495239 up:source unirule:MF_01376 .
?this up:alternativeName ?name1 ,
?name2 ;
up:annotation ?annotation4 ,
?annotation5 ,
?annotation7 ,
?annotation8 ,
?annotation9 ;
up:classifiedWith GO:0047304 ,
keyword:32 ,
keyword:663 ,
keyword:670 ,
keyword:808 ;
up:recommendedName ?name0 .
?name0 up:ecName '2.6.1.37' ;
up:fullName '2-aminoethylphosphonate--pyruvate transaminase' ;
rdf:type up:Structured_Name .
?name1 up:fullName '2-aminoethylphosphonate aminotransferase' ;
rdf:type up:Structured_Name .
?name2 up:fullName 'AEP transaminase' ;
up:shortName 'AEPT' ;
rdf:type up:Structured_Name .
?gene3 skos:prefLabel 'phnW' .
?annotation4 a up:Function_Annotation ;
rdfs:comment 'Involved in phosphonate degradation.' .
?annotation5 up:activity ?activity6 ;
rdf:type up:Catalytic_Activity_Annotation .
?activity6 up:catalyticActivity ;
up:enzymeClass .
?annotation7 up:cofactor chebi:597326 ;
rdf:type up:Cofactor_Annotation .
?annotation8 a up:Subunit_Annotation ;
rdfs:comment 'Homodimer.' .
?annotation9 a up:Similarity_Annotation ;
rdfs:comment 'Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. PhnW subfamily.' .
?pfs10 up:annotation ?annotation11 .
?annotation11 faldo:begin ?pfsb12 ;
faldo:end ?pfse13 ;
rdf:type up:Modified_Residue_Annotation ;
rdfs:comment 'N6-(pyridoxal phosphate)lysine' .
?pfsb12 faldo:position ?thisPositionOn14 ;
rdf:type faldo:ExactPosition .
?pfse13 faldo:position ?thisPositionOn15 ;
rdf:type faldo:ExactPosition .
_:495240 a rdf:Statement ;
up:attribution _:495225 ;
rdf:subject ?this ;
rdf:predicate up:recommendedName ;
rdf:object ?name0 .
_:495241 a rdf:Statement ;
up:attribution _:495226 ;
rdf:subject ?this ;
rdf:predicate up:alternativeName ;
rdf:object ?name1 .
_:495242 a rdf:Statement ;
up:attribution _:495227 ;
rdf:subject ?this ;
rdf:predicate up:alternativeName ;
rdf:object ?name2 .
_:495243 a rdf:Statement ;
up:attribution _:495228 ;
rdf:subject ?gene3 ;
rdf:predicate up:encodedBy ;
rdf:object ?gene3 .
_:495244 a rdf:Statement ;
up:attribution _:495229 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation4 .
_:495245 a rdf:Statement ;
up:attribution _:495230 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation5 .
_:495246 a rdf:Statement ;
up:attribution _:495231 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation7 .
_:495247 a rdf:Statement ;
up:attribution _:495232 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation8 .
_:495248 a rdf:Statement ;
up:attribution _:495233 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation9 .
_:495249 a rdf:Statement ;
up:attribution _:495234 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:32 .
_:495250 a rdf:Statement ;
up:attribution _:495235 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:663 .
_:495251 a rdf:Statement ;
up:attribution _:495236 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:670 .
_:495252 a rdf:Statement ;
up:attribution _:495237 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:808 .
_:495253 a rdf:Statement ;
up:attribution _:495238 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0047304 .
_:495254 a rdf:Statement ;
up:source unirule:MF_01376 ;
rdf:subject ?pfs10 ;
rdf:predicate up:annotation ;
rdf:object ?annotation11 .
_:495255 a rdf:Statement ;
up:attribution _:495239 ;
rdf:subject ?pfs10 ;
rdf:predicate up:annotation ;
rdf:object ?annotation11 .
}
WHERE {
#baseURI: http://purl.uniprot.org/unirule/MF_01376
#Rule MF_01376 Created by:? on:2007-04-19 Modified by:Edouard de Castro on:2024-09-02
VALUES ?supertaxon16 {taxon:976 taxon:1239 taxon:1224}
?this up:organism ?thisOrganism ;
rdfs:seeAlso signature:MF_01376 .
?thisOrganism rdfs:subClassOf+ ?supertaxon16 .
BIND(URI(CONCAT(STR(?this), '#MF_01376a0')) AS ?name0) .
BIND(URI(CONCAT(STR(?this), '#MF_01376a1')) AS ?name1) .
BIND(URI(CONCAT(STR(?this), '#MF_01376a2')) AS ?name2) .
BIND(URI(CONCAT(STR(?this), '#MF_01376a4')) AS ?annotation4) .
BIND(URI(CONCAT(STR(?this), '#MF_01376a5')) AS ?annotation5) .
BIND(URI(CONCAT(STR(?this), '#MF_01376a7')) AS ?annotation7) .
BIND(URI(CONCAT(STR(?this), '#MF_01376a8')) AS ?annotation8) .
BIND(URI(CONCAT(STR(?this), '#MF_01376a9')) AS ?annotation9) .
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch21 faldo:location ?templateMotifSequenceMatchRegionP9606022 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP9606024 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarP96060MF_0137617 .
?templateMotifSequenceMatchRegionP9606022 faldo:begin ?templateMotifSequenceMatchBeginP9606023 .
?templateMotifSequenceMatchBeginP9606023 faldo:position ?templateMotifSequenceMatchBeginPositionP9606018 ;
faldo:reference isoform:P96060-1 .
?templateMotifSequenceProfileAlignmentOperationP9606024 edam:has_input signature:MF_01376 ;
rdf:type edam:operation_0300 .
?targetMotifMatch25 faldo:location ?targetMotifMatchRegionMatch26 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_0137628 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarP96060MF_0137619 .
?targetMotifMatchRegionMatch26 faldo:begin ?targetMotifMatchRegionMatchBeginMF_0137627 .
?targetMotifMatchRegionMatchBeginMF_0137627 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0137620 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_0137628 edam:has_input signature:MF_01376 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP96060MF_0137617, 1, (STRLEN(?templateMotifCigarP96060MF_0137617) - STRLEN(REPLACE(?templateMotifCigarP96060MF_0137617, CONCAT('^(?:-*[^-]){', STR(((194 - ?templateMotifSequenceMatchBeginPositionP9606018) + 1)), '}'), '')))), '[a-z]', '')) AS ?step129) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP96060MF_0137619, 1, (STRLEN(?targetMotifMatchCigarP96060MF_0137619) - STRLEN(REPLACE(?targetMotifMatchCigarP96060MF_0137619, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step129), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP96060MF_0137619, 1, (STRLEN(?targetMotifMatchCigarP96060MF_0137619) - STRLEN(REPLACE(?targetMotifMatchCigarP96060MF_0137619, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step129), '}'), '')))), '[^-]', ''))) AS ?step230) .
BIND(((?step230 + ?targetMotifMatchRegionMatchBeginPositionMF_0137620) - 1) AS ?thisPositionOn14) .
BIND(?thisPositionOn14 AS ?thisPositionOn15) .
BIND(?this AS ?pfs1t31) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn14))) AS ?pfsb12) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn15))) AS ?pfse13) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn14, 1) = 'K')) .
BIND(URI(CONCAT(STR(?this), '#MF_01376a11')) AS ?annotation11) .
BIND(?this AS ?pfs10) .
}
}
"xsd:string |
