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| Subject | Predicate | Object |
|---|---|---|
| http://purl.uniprot.org/unirules/MF_01429#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01429#construct-template-15 |
| http://purl.uniprot.org/unirules/MF_01429#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01429#construct-template-13 |
| http://purl.uniprot.org/unirules/MF_01429#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01429#construct-template-55 |
| http://purl.uniprot.org/unirules/MF_01429#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01429#construct-template-66 |
| http://purl.uniprot.org/unirules/MF_01429#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01429#construct-template-65 |
| http://purl.uniprot.org/unirules/MF_01429#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01429#construct-template-63 |
| http://purl.uniprot.org/unirules/MF_01429#construct | http://www.w3.org/ns/shacl#prefixes | http://purl.uniprot.org/unirules/ |
| http://purl.uniprot.org/unirules/MF_01429#construct | http://spinrdf.org/sp#where | http://purl.uniprot.org/unirules/MF_01429#construct-where-list-0 |
| http://purl.uniprot.org/unirules/MF_01429#construct | http://spinrdf.org/sp#templates | http://purl.uniprot.org/unirules/MF_01429#construct-template-list-0 |
| http://purl.uniprot.org/unirules/MF_01429#construct | http://www.w3.org/ns/shacl#construct | "CONSTRUCT { _:517317 up:source unirule:MF_01429 . _:517318 up:source unirule:MF_01429 . _:517319 up:source unirule:MF_01429 . _:517320 up:source unirule:MF_01429 . _:517321 up:source unirule:MF_01429 . _:517322 up:source unirule:MF_01429 . _:517323 up:source unirule:MF_01429 . _:517324 up:source unirule:MF_01429 . _:517325 up:source unirule:MF_01429 . _:517326 up:source unirule:MF_01429 . _:517327 up:source unirule:MF_01429 . _:517328 up:source unirule:MF_01429 . _:517329 up:source unirule:MF_01429 . ?this up:alternativeName ?name1 ; up:annotation ?annotation3 , ?annotation4 , ?annotation5 ; up:classifiedWith GO:0005506 , keyword:408 ; up:recommendedName ?name0 . ?name0 up:fullName 'Iron-binding protein IscA' ; rdf:type up:Structured_Name . ?name1 up:fullName 'Iron-sulfur cluster assembly protein' ; rdf:type up:Structured_Name . ?gene2 skos:prefLabel 'iscA' . ?annotation3 a up:Function_Annotation ; rdfs:comment 'Is able to transfer iron-sulfur clusters to apo-ferredoxin. Multiple cycles of [2Fe2S] cluster formation and transfer are observed, suggesting that IscA acts catalytically. Recruits intracellular free iron so as to provide iron for the assembly of transient iron-sulfur cluster in IscU in the presence of IscS, L-cysteine and the thioredoxin reductase system TrxA/TrxB.' . ?annotation4 a up:Subunit_Annotation ; rdfs:comment 'Homodimer; may form tetramers and higher multimers.' . ?annotation5 a up:Similarity_Annotation ; rdfs:comment 'Belongs to the HesB/IscA family.' . ?case6 up:classifiedWith GO:0016226 , keyword:479 . ?pfs7 up:annotation ?annotation8 , ?annotation14 , ?annotation20 . ?annotation8 faldo:begin ?pfsb9 ; faldo:end ?pfse10 ; up:ligand ?ligand11 ; rdf:type up:Binding_Site_Annotation . ?pfsb9 faldo:position ?thisPositionOn12 ; rdf:type faldo:ExactPosition . ?pfse10 faldo:position ?thisPositionOn13 ; rdf:type faldo:ExactPosition . ?ligand11 rdfs:subClassOf chebi:24875 . ?annotation14 faldo:begin ?pfsb15 ; faldo:end ?pfse16 ; up:ligand ?ligand17 ; rdf:type up:Binding_Site_Annotation . ?pfsb15 faldo:position ?thisPositionOn18 ; rdf:type faldo:ExactPosition . ?pfse16 faldo:position ?thisPositionOn19 ; rdf:type faldo:ExactPosition . ?ligand17 rdfs:subClassOf chebi:24875 . ?annotation20 faldo:begin ?pfsb21 ; faldo:end ?pfse22 ; up:ligand ?ligand23 ; rdf:type up:Binding_Site_Annotation . ?pfsb21 faldo:position ?thisPositionOn24 ; rdf:type faldo:ExactPosition . ?pfse22 faldo:position ?thisPositionOn25 ; rdf:type faldo:ExactPosition . ?ligand23 rdfs:subClassOf chebi:24875 . _:517330 a rdf:Statement ; up:attribution _:517317 ; rdf:subject ?this ; rdf:predicate up:recommendedName ; rdf:object ?name0 . _:517331 a rdf:Statement ; up:attribution _:517318 ; rdf:subject ?this ; rdf:predicate up:alternativeName ; rdf:object ?name1 . _:517332 a rdf:Statement ; up:attribution _:517319 ; rdf:subject ?gene2 ; rdf:predicate up:encodedBy ; rdf:object ?gene2 . _:517333 a rdf:Statement ; up:attribution _:517320 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation3 . _:517334 a rdf:Statement ; up:attribution _:517321 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation4 . _:517335 a rdf:Statement ; up:attribution _:517322 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation5 . _:517336 a rdf:Statement ; up:attribution _:517323 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:408 . _:517337 a rdf:Statement ; up:attribution _:517324 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0005506 . _:517338 a rdf:Statement ; up:attribution _:517325 ; rdf:subject ?case6 ; rdf:predicate up:classifiedWith ; rdf:object keyword:479 . _:517339 a rdf:Statement ; up:attribution _:517326 ; rdf:subject ?case6 ; rdf:predicate up:classifiedWith ; rdf:object GO:0016226 . _:517340 a rdf:Statement ; up:source unirule:MF_01429 ; rdf:subject ?pfs7 ; rdf:predicate up:annotation ; rdf:object ?annotation8 . _:517341 a rdf:Statement ; up:attribution _:517327 ; rdf:subject ?pfs7 ; rdf:predicate up:annotation ; rdf:object ?annotation8 . _:517342 a rdf:Statement ; up:source unirule:MF_01429 ; rdf:subject ?pfs7 ; rdf:predicate up:annotation ; rdf:object ?annotation14 . _:517343 a rdf:Statement ; up:attribution _:517328 ; rdf:subject ?pfs7 ; rdf:predicate up:annotation ; rdf:object ?annotation14 . _:517344 a rdf:Statement ; up:source unirule:MF_01429 ; rdf:subject ?pfs7 ; rdf:predicate up:annotation ; rdf:object ?annotation20 . _:517345 a rdf:Statement ; up:attribution _:517329 ; rdf:subject ?pfs7 ; rdf:predicate up:annotation ; rdf:object ?annotation20 . } WHERE { #baseURI: http://purl.uniprot.org/unirule/MF_01429 #Rule MF_01429 Created by:? on:2005-10-27 Modified by:Edouard de Castro on:2023-06-01 ?this up:organism ?thisOrganism ; rdfs:seeAlso signature:MF_01429 . ?thisOrganism rdfs:subClassOf+ taxon:91347 . BIND(URI(CONCAT(STR(?this), '#MF_01429a0')) AS ?name0) . BIND(URI(CONCAT(STR(?this), '#MF_01429a1')) AS ?name1) . BIND(URI(CONCAT(STR(?this), '#MF_01429a3')) AS ?annotation3) . BIND(URI(CONCAT(STR(?this), '#MF_01429a4')) AS ?annotation4) . BIND(URI(CONCAT(STR(?this), '#MF_01429a5')) AS ?annotation5) . OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch30 faldo:location ?templateMotifSequenceMatchRegionP0AAC831 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0AAC833 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP0AAC8MF_0142926 . ?templateMotifSequenceMatchRegionP0AAC831 faldo:begin ?templateMotifSequenceMatchBeginP0AAC832 . ?templateMotifSequenceMatchBeginP0AAC832 faldo:position ?templateMotifSequenceMatchBeginPositionP0AAC827 ; faldo:reference isoform:P0AAC8-1 . ?templateMotifSequenceProfileAlignmentOperationP0AAC833 edam:has_input signature:MF_01429 ; rdf:type edam:operation_0300 . ?targetMotifMatch34 faldo:location ?targetMotifMatchRegionMatch35 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_0142937 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP0AAC8MF_0142928 . ?targetMotifMatchRegionMatch35 faldo:begin ?targetMotifMatchRegionMatchBeginMF_0142936 . ?targetMotifMatchRegionMatchBeginMF_0142936 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0142929 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_0142937 edam:has_input signature:MF_01429 ; rdf:type edam:operation_0300 . BIND(?this AS ?tagFTGRP_1) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0AAC8MF_0142926, 1, (STRLEN(?templateMotifCigarP0AAC8MF_0142926) - STRLEN(REPLACE(?templateMotifCigarP0AAC8MF_0142926, CONCAT('^(?:-*[^-]){', STR(((35 - ?templateMotifSequenceMatchBeginPositionP0AAC827) + 1)), '}'), '')))), '[a-z]', '')) AS ?step138) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0AAC8MF_0142928, 1, (STRLEN(?targetMotifMatchCigarP0AAC8MF_0142928) - STRLEN(REPLACE(?targetMotifMatchCigarP0AAC8MF_0142928, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step138), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0AAC8MF_0142928, 1, (STRLEN(?targetMotifMatchCigarP0AAC8MF_0142928) - STRLEN(REPLACE(?targetMotifMatchCigarP0AAC8MF_0142928, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step138), '}'), '')))), '[^-]', ''))) AS ?step239) . BIND(((?step239 + ?targetMotifMatchRegionMatchBeginPositionMF_0142929) - 1) AS ?thisPositionOn12) . BIND(?thisPositionOn12 AS ?thisPositionOn13) . BIND(?this AS ?pfs1t40) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn12))) AS ?pfsb9) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn13))) AS ?pfse10) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn12, 1) = 'C')) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0AAC8MF_0142926, 1, (STRLEN(?templateMotifCigarP0AAC8MF_0142926) - STRLEN(REPLACE(?templateMotifCigarP0AAC8MF_0142926, CONCAT('^(?:-*[^-]){', STR(((99 - ?templateMotifSequenceMatchBeginPositionP0AAC827) + 1)), '}'), '')))), '[a-z]', '')) AS ?step141) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0AAC8MF_0142928, 1, (STRLEN(?targetMotifMatchCigarP0AAC8MF_0142928) - STRLEN(REPLACE(?targetMotifMatchCigarP0AAC8MF_0142928, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step141), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0AAC8MF_0142928, 1, (STRLEN(?targetMotifMatchCigarP0AAC8MF_0142928) - STRLEN(REPLACE(?targetMotifMatchCigarP0AAC8MF_0142928, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step141), '}'), '')))), '[^-]', ''))) AS ?step242) . BIND(((?step242 + ?targetMotifMatchRegionMatchBeginPositionMF_0142929) - 1) AS ?thisPositionOn18) . BIND(?thisPositionOn18 AS ?thisPositionOn19) . BIND(?this AS ?pfs1t43) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn18))) AS ?pfsb15) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn19))) AS ?pfse16) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn18, 1) = 'C')) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0AAC8MF_0142926, 1, (STRLEN(?templateMotifCigarP0AAC8MF_0142926) - STRLEN(REPLACE(?templateMotifCigarP0AAC8MF_0142926, CONCAT('^(?:-*[^-]){', STR(((101 - ?templateMotifSequenceMatchBeginPositionP0AAC827) + 1)), '}'), '')))), '[a-z]', '')) AS ?step144) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0AAC8MF_0142928, 1, (STRLEN(?targetMotifMatchCigarP0AAC8MF_0142928) - STRLEN(REPLACE(?targetMotifMatchCigarP0AAC8MF_0142928, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step144), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0AAC8MF_0142928, 1, (STRLEN(?targetMotifMatchCigarP0AAC8MF_0142928) - STRLEN(REPLACE(?targetMotifMatchCigarP0AAC8MF_0142928, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step144), '}'), '')))), '[^-]', ''))) AS ?step245) . BIND(((?step245 + ?targetMotifMatchRegionMatchBeginPositionMF_0142929) - 1) AS ?thisPositionOn24) . BIND(?thisPositionOn24 AS ?thisPositionOn25) . BIND(?this AS ?pfs1t46) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn24))) AS ?pfsb21) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn25))) AS ?pfse22) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn24, 1) = 'C')) . BIND(?this AS ?pfs7) . } OPTIONAL { ?this a up:Protein . BIND(?this AS ?caseWithTag47) . } BIND(IF(BOUND(?tagFTGRP_1), ?caseWithTag47, ?UNBOUND_VARIABLE) AS ?case6) . } "xsd:string |
| http://purl.uniprot.org/unirules/MF_01429 | http://www.w3.org/ns/shacl#rule | http://purl.uniprot.org/unirules/MF_01429#construct |