| http://purl.uniprot.org/unirules/MF_01468#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01468#construct-template-90 |
| http://purl.uniprot.org/unirules/MF_01468#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01468#construct-template-28 |
| http://purl.uniprot.org/unirules/MF_01468#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01468#construct-template-50 |
| http://purl.uniprot.org/unirules/MF_01468#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01468#construct-template-74 |
| http://purl.uniprot.org/unirules/MF_01468#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01468#construct-template-73 |
| http://purl.uniprot.org/unirules/MF_01468#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01468#construct-template-72 |
| http://purl.uniprot.org/unirules/MF_01468#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01468#construct-template-71 |
| http://purl.uniprot.org/unirules/MF_01468#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01468#construct-template-70 |
| http://purl.uniprot.org/unirules/MF_01468#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01468#construct-template-91 |
| http://purl.uniprot.org/unirules/MF_01468#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01468#construct-template-69 |
| http://purl.uniprot.org/unirules/MF_01468#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01468#construct-template-68 |
| http://purl.uniprot.org/unirules/MF_01468#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01468#construct-template-67 |
| http://purl.uniprot.org/unirules/MF_01468#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01468#construct-template-66 |
| http://purl.uniprot.org/unirules/MF_01468#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01468#construct-template-89 |
| http://purl.uniprot.org/unirules/MF_01468#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01468#construct-template-65 |
| http://purl.uniprot.org/unirules/MF_01468#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01468#construct-template-64 |
| http://purl.uniprot.org/unirules/MF_01468#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01468#construct-template-88 |
| http://purl.uniprot.org/unirules/MF_01468#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01468#construct-template-63 |
| http://purl.uniprot.org/unirules/MF_01468#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01468#construct-template-87 |
| http://purl.uniprot.org/unirules/MF_01468#construct | http://www.w3.org/ns/shacl#prefixes | http://purl.uniprot.org/unirules/ |
| http://purl.uniprot.org/unirules/MF_01468#construct | http://spinrdf.org/sp#where | http://purl.uniprot.org/unirules/MF_01468#construct-where-list-0 |
| http://purl.uniprot.org/unirules/MF_01468#construct | http://spinrdf.org/sp#templates | http://purl.uniprot.org/unirules/MF_01468#construct-template-list-0 |
| http://purl.uniprot.org/unirules/MF_01468#construct | http://www.w3.org/ns/shacl#construct | "CONSTRUCT {
_:532312 up:source unirule:MF_01468 .
_:532313 up:source unirule:MF_01468 .
_:532314 up:source unirule:MF_01468 .
_:532315 up:source unirule:MF_01468 .
_:532316 up:source unirule:MF_01468 .
_:532317 up:source unirule:MF_01468 .
_:532318 up:source unirule:MF_01468 .
_:532319 up:source unirule:MF_01468 .
_:532320 up:source unirule:MF_01468 .
_:532321 up:source unirule:MF_01468 .
_:532322 up:source unirule:MF_01468 .
_:532323 up:source unirule:MF_01468 .
_:532324 up:source unirule:MF_01468 .
_:532325 up:source unirule:MF_01468 .
_:532326 up:source unirule:MF_01468 .
_:532327 up:source unirule:MF_01468 .
_:532328 up:source unirule:MF_01468 .
_:532329 up:source unirule:MF_01468 .
_:532330 up:source unirule:MF_01468 .
_:532331 up:source unirule:MF_01468 .
_:532332 up:source unirule:MF_01468 .
_:532333 up:source unirule:MF_01468 .
?this up:alternativeName ?name1 ;
up:annotation ?annotation3 ,
?annotation4 ,
?annotation5 ,
?annotation6 ,
?annotation8 ;
up:classifiedWith GO:0005737 ,
GO:0006364 ,
GO:0019843 ,
GO:0042254 ,
keyword:255 ,
keyword:378 ,
keyword:460 ,
keyword:540 ,
keyword:690 ,
keyword:694 ,
keyword:698 ,
keyword:699 ,
keyword:963 ;
up:recommendedName ?name0 .
?name0 up:ecName '3.1.26.-' ;
up:fullName 'Mini-ribonuclease 3' ;
up:shortName 'Mini-RNase 3' ,
'Mini-3' ;
rdf:type up:Structured_Name .
?name1 up:fullName 'Mini-RNase III' ;
up:shortName 'Mini-III' ;
rdf:type up:Structured_Name .
?gene2 skos:prefLabel 'mrnC' .
?annotation3 a up:Function_Annotation ;
rdfs:comment "Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc); Rnc processes 30S rRNA into smaller rRNA precursors." .
?annotation4 up:cofactor chebi:18420 ;
rdf:type up:Cofactor_Annotation .
?annotation5 a up:Subunit_Annotation ;
rdfs:comment 'Homodimer.' .
?annotation6 a up:Subcellular_Location_Annotation .
?annotation6li7 up:cellularComponent .
?annotation8 a up:Similarity_Annotation ;
rdfs:comment 'Belongs to the MrnC RNase family.' .
?pfs9 up:annotation ?annotation10 .
?annotation10 faldo:begin ?pfsb11 ;
faldo:end ?pfse12 ;
rdf:type up:Active_Site_Annotation .
?pfsb11 faldo:position ?thisPositionOn13 ;
rdf:type faldo:ExactPosition .
?pfse12 faldo:position ?thisPositionOn14 ;
rdf:type faldo:ExactPosition .
_:532334 a rdf:Statement ;
up:attribution _:532312 ;
rdf:subject ?this ;
rdf:predicate up:recommendedName ;
rdf:object ?name0 .
_:532335 a rdf:Statement ;
up:attribution _:532313 ;
rdf:subject ?this ;
rdf:predicate up:alternativeName ;
rdf:object ?name1 .
_:532336 a rdf:Statement ;
up:attribution _:532314 ;
rdf:subject ?gene2 ;
rdf:predicate up:encodedBy ;
rdf:object ?gene2 .
_:532337 a rdf:Statement ;
up:attribution _:532315 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation3 .
_:532338 a rdf:Statement ;
up:attribution _:532316 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation4 .
_:532339 a rdf:Statement ;
up:attribution _:532317 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation5 .
_:532340 a rdf:Statement ;
up:attribution _:532318 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation6 .
_:532341 a rdf:Statement ;
up:attribution _:532319 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation8 .
_:532342 a rdf:Statement ;
up:attribution _:532320 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:963 .
_:532343 a rdf:Statement ;
up:attribution _:532321 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:255 .
_:532344 a rdf:Statement ;
up:attribution _:532322 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:378 .
_:532345 a rdf:Statement ;
up:attribution _:532323 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:460 .
_:532346 a rdf:Statement ;
up:attribution _:532324 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:540 .
_:532347 a rdf:Statement ;
up:attribution _:532325 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:690 .
_:532348 a rdf:Statement ;
up:attribution _:532326 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:694 .
_:532349 a rdf:Statement ;
up:attribution _:532327 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:698 .
_:532350 a rdf:Statement ;
up:attribution _:532328 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:699 .
_:532351 a rdf:Statement ;
up:attribution _:532329 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0019843 .
_:532352 a rdf:Statement ;
up:attribution _:532330 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0006364 .
_:532353 a rdf:Statement ;
up:attribution _:532331 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0042254 .
_:532354 a rdf:Statement ;
up:attribution _:532332 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0005737 .
_:532355 a rdf:Statement ;
up:source unirule:MF_01468 ;
rdf:subject ?pfs9 ;
rdf:predicate up:annotation ;
rdf:object ?annotation10 .
_:532356 a rdf:Statement ;
up:attribution _:532333 ;
rdf:subject ?pfs9 ;
rdf:predicate up:annotation ;
rdf:object ?annotation10 .
}
WHERE {
#baseURI: http://purl.uniprot.org/unirule/MF_01468
#Rule MF_01468 Created by:? on:2012-01-24 Modified by:Edouard de Castro on:2023-02-17
VALUES ?supertaxon15 {taxon:1117 taxon:1239 taxon:32066 taxon:544448 taxon:188708}
?this up:organism ?thisOrganism ;
rdfs:seeAlso signature:MF_01468 .
?thisOrganism rdfs:subClassOf+ ?supertaxon15 .
BIND(URI(CONCAT(STR(?this), '#MF_01468a0')) AS ?name0) .
BIND(URI(CONCAT(STR(?this), '#MF_01468a1')) AS ?name1) .
BIND(URI(CONCAT(STR(?this), '#MF_01468a3')) AS ?annotation3) .
BIND(URI(CONCAT(STR(?this), '#MF_01468a4')) AS ?annotation4) .
BIND(URI(CONCAT(STR(?this), '#MF_01468a5')) AS ?annotation5) .
BIND(URI(CONCAT(STR(?this), '#MF_01468a6')) AS ?annotation6) .
BIND(URI(CONCAT(STR(?this), '#MF_01468a8')) AS ?annotation8) .
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch20 faldo:location ?templateMotifSequenceMatchRegionO3141821 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationO3141823 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarO31418MF_0146816 .
?templateMotifSequenceMatchRegionO3141821 faldo:begin ?templateMotifSequenceMatchBeginO3141822 .
?templateMotifSequenceMatchBeginO3141822 faldo:position ?templateMotifSequenceMatchBeginPositionO3141817 ;
faldo:reference isoform:O31418-1 .
?templateMotifSequenceProfileAlignmentOperationO3141823 edam:has_input signature:MF_01468 ;
rdf:type edam:operation_0300 .
?targetMotifMatch24 faldo:location ?targetMotifMatchRegionMatch25 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_0146827 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarO31418MF_0146818 .
?targetMotifMatchRegionMatch25 faldo:begin ?targetMotifMatchRegionMatchBeginMF_0146826 .
?targetMotifMatchRegionMatchBeginMF_0146826 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0146819 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_0146827 edam:has_input signature:MF_01468 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarO31418MF_0146816, 1, (STRLEN(?templateMotifCigarO31418MF_0146816) - STRLEN(REPLACE(?templateMotifCigarO31418MF_0146816, CONCAT('^(?:-*[^-]){', STR(((23 - ?templateMotifSequenceMatchBeginPositionO3141817) + 1)), '}'), '')))), '[a-z]', '')) AS ?step128) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarO31418MF_0146818, 1, (STRLEN(?targetMotifMatchCigarO31418MF_0146818) - STRLEN(REPLACE(?targetMotifMatchCigarO31418MF_0146818, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step128), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarO31418MF_0146818, 1, (STRLEN(?targetMotifMatchCigarO31418MF_0146818) - STRLEN(REPLACE(?targetMotifMatchCigarO31418MF_0146818, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step128), '}'), '')))), '[^-]', ''))) AS ?step229) .
BIND(((?step229 + ?targetMotifMatchRegionMatchBeginPositionMF_0146819) - 1) AS ?thisPositionOn13) .
BIND(?thisPositionOn13 AS ?thisPositionOn14) .
BIND(?this AS ?pfs1t30) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn13))) AS ?pfsb11) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn14))) AS ?pfse12) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn13, 1) = 'D')) .
BIND(URI(CONCAT(STR(?this), '#MF_01468a10')) AS ?annotation10) .
BIND(?this AS ?pfs9) .
}
}
"xsd:string |
| http://purl.uniprot.org/unirules/MF_01468 | http://www.w3.org/ns/shacl#rule | http://purl.uniprot.org/unirules/MF_01468#construct |
