| http://purl.uniprot.org/unirules/MF_01666#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01666#construct-template-50 |
| http://purl.uniprot.org/unirules/MF_01666#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01666#construct-template-75 |
| http://purl.uniprot.org/unirules/MF_01666#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01666#construct-template-51 |
| http://purl.uniprot.org/unirules/MF_01666#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01666#construct-template-52 |
| http://purl.uniprot.org/unirules/MF_01666#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01666#construct-template-76 |
| http://purl.uniprot.org/unirules/MF_01666#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01666#construct-template-53 |
| http://purl.uniprot.org/unirules/MF_01666#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01666#construct-template-77 |
| http://purl.uniprot.org/unirules/MF_01666#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01666#construct-template-78 |
| http://purl.uniprot.org/unirules/MF_01666#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01666#construct-template-30 |
| http://purl.uniprot.org/unirules/MF_01666#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01666#construct-template-54 |
| http://purl.uniprot.org/unirules/MF_01666#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01666#construct-template-79 |
| http://purl.uniprot.org/unirules/MF_01666#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01666#construct-template-31 |
| http://purl.uniprot.org/unirules/MF_01666#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01666#construct-template-55 |
| http://purl.uniprot.org/unirules/MF_01666#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01666#construct-template-56 |
| http://purl.uniprot.org/unirules/MF_01666#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01666#construct-template-32 |
| http://purl.uniprot.org/unirules/MF_01666#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01666#construct-template-57 |
| http://purl.uniprot.org/unirules/MF_01666#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01666#construct-template-33 |
| http://purl.uniprot.org/unirules/MF_01666#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01666#construct-template-34 |
| http://purl.uniprot.org/unirules/MF_01666#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01666#construct-template-58 |
| http://purl.uniprot.org/unirules/MF_01666#construct | http://www.w3.org/ns/shacl#prefixes | http://purl.uniprot.org/unirules/ |
| http://purl.uniprot.org/unirules/MF_01666#construct | http://spinrdf.org/sp#where | http://purl.uniprot.org/unirules/MF_01666#construct-where-list-0 |
| http://purl.uniprot.org/unirules/MF_01666#construct | http://spinrdf.org/sp#templates | http://purl.uniprot.org/unirules/MF_01666#construct-template-list-0 |
| http://purl.uniprot.org/unirules/MF_01666#construct | http://www.w3.org/ns/shacl#construct | "CONSTRUCT {
_:608544 up:source unirule:MF_01666 .
_:608545 up:source unirule:MF_01666 .
_:608546 up:source unirule:MF_01666 .
_:608547 up:source unirule:MF_01666 .
_:608548 up:source unirule:MF_01666 .
_:608549 up:source unirule:MF_01666 .
_:608550 up:source unirule:MF_01666 .
_:608551 up:source unirule:MF_01666 .
_:608552 up:source unirule:MF_01666 .
_:608553 up:source unirule:MF_01666 .
_:608554 up:source unirule:MF_01666 .
_:608555 up:source unirule:MF_01666 .
_:608556 up:source unirule:MF_01666 .
_:608557 up:source unirule:MF_01666 .
_:608558 up:source unirule:MF_01666 .
_:608559 up:source unirule:MF_01666 .
_:608560 up:source unirule:MF_01666 .
?this up:alternativeName ?name1 ;
up:annotation ?annotation3 ,
?annotation4 ,
?annotation6 ,
?annotation8 ,
?annotation10 ,
?annotation12 ;
up:classifiedWith GO:0016618 ,
GO:0030267 ,
keyword:520 ,
keyword:521 ,
keyword:560 ,
keyword:963 ;
up:recommendedName ?name0 .
?name0 up:ecName '1.1.1.81' ,
'1.1.1.79' ;
up:fullName 'Glyoxylate/hydroxypyruvate reductase A' ;
rdf:type up:Structured_Name .
?name1 up:fullName '2-ketoacid reductase' ;
rdf:type up:Structured_Name .
?gene2 skos:prefLabel 'ghrA' .
?annotation3 a up:Function_Annotation ;
rdfs:comment 'Catalyzes the NADPH-dependent reduction of glyoxylate and hydroxypyruvate into glycolate and glycerate, respectively.' .
?annotation4 up:activity ?activity5 ;
rdf:type up:Catalytic_Activity_Annotation .
?activity5 up:catalyticActivity ;
up:enzymeClass .
?annotation6 up:activity ?activity7 ;
rdf:type up:Catalytic_Activity_Annotation .
?activity7 up:catalyticActivity ;
up:enzymeClass .
?annotation8 up:activity ?activity9 ;
rdf:type up:Catalytic_Activity_Annotation .
?activity9 up:catalyticActivity ;
up:enzymeClass .
?annotation10 a up:Subcellular_Location_Annotation .
?annotation10li11 up:cellularComponent .
?annotation12 a up:Similarity_Annotation ;
rdfs:comment 'Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. GhrA subfamily.' .
?pfs13 up:annotation ?annotation14 .
?annotation14 faldo:begin ?pfsb15 ;
faldo:end ?pfse16 ;
rdf:type up:Active_Site_Annotation .
?pfsb15 faldo:position ?thisPositionOn17 ;
rdf:type faldo:ExactPosition .
?pfse16 faldo:position ?thisPositionOn18 ;
rdf:type faldo:ExactPosition .
?pfs19 up:annotation ?annotation20 .
?annotation20 faldo:begin ?pfsb21 ;
faldo:end ?pfse22 ;
rdf:type up:Active_Site_Annotation ;
rdfs:comment 'Proton donor' .
?pfsb21 faldo:position ?thisPositionOn23 ;
rdf:type faldo:ExactPosition .
?pfse22 faldo:position ?thisPositionOn24 ;
rdf:type faldo:ExactPosition .
_:608561 a rdf:Statement ;
up:attribution _:608544 ;
rdf:subject ?this ;
rdf:predicate up:recommendedName ;
rdf:object ?name0 .
_:608562 a rdf:Statement ;
up:attribution _:608545 ;
rdf:subject ?this ;
rdf:predicate up:alternativeName ;
rdf:object ?name1 .
_:608563 a rdf:Statement ;
up:attribution _:608546 ;
rdf:subject ?gene2 ;
rdf:predicate up:encodedBy ;
rdf:object ?gene2 .
_:608564 a rdf:Statement ;
up:attribution _:608547 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation3 .
_:608565 a rdf:Statement ;
up:attribution _:608548 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation4 .
_:608566 a rdf:Statement ;
up:attribution _:608549 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation6 .
_:608567 a rdf:Statement ;
up:attribution _:608550 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation8 .
_:608568 a rdf:Statement ;
up:attribution _:608551 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation10 .
_:608569 a rdf:Statement ;
up:attribution _:608552 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation12 .
_:608570 a rdf:Statement ;
up:attribution _:608553 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:963 .
_:608571 a rdf:Statement ;
up:attribution _:608554 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:520 .
_:608572 a rdf:Statement ;
up:attribution _:608555 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:521 .
_:608573 a rdf:Statement ;
up:attribution _:608556 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:560 .
_:608574 a rdf:Statement ;
up:attribution _:608557 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0016618 .
_:608575 a rdf:Statement ;
up:attribution _:608558 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0030267 .
_:608576 a rdf:Statement ;
up:source unirule:MF_01666 ;
rdf:subject ?pfs13 ;
rdf:predicate up:annotation ;
rdf:object ?annotation14 .
_:608577 a rdf:Statement ;
up:attribution _:608559 ;
rdf:subject ?pfs13 ;
rdf:predicate up:annotation ;
rdf:object ?annotation14 .
_:608578 a rdf:Statement ;
up:source unirule:MF_01666 ;
rdf:subject ?pfs19 ;
rdf:predicate up:annotation ;
rdf:object ?annotation20 .
_:608579 a rdf:Statement ;
up:attribution _:608560 ;
rdf:subject ?pfs19 ;
rdf:predicate up:annotation ;
rdf:object ?annotation20 .
}
WHERE {
#baseURI: http://purl.uniprot.org/unirule/MF_01666
#Rule MF_01666 Created by:? on:2008-08-05 Modified by:Edouard de Castro on:2024-09-03
?this up:organism ?thisOrganism ;
rdfs:seeAlso signature:MF_01666 .
?thisOrganism rdfs:subClassOf+ taxon:91347 .
BIND(URI(CONCAT(STR(?this), '#MF_01666a0')) AS ?name0) .
BIND(URI(CONCAT(STR(?this), '#MF_01666a1')) AS ?name1) .
BIND(URI(CONCAT(STR(?this), '#MF_01666a3')) AS ?annotation3) .
BIND(URI(CONCAT(STR(?this), '#MF_01666a4')) AS ?annotation4) .
BIND(URI(CONCAT(STR(?this), '#MF_01666a6')) AS ?annotation6) .
BIND(URI(CONCAT(STR(?this), '#MF_01666a8')) AS ?annotation8) .
BIND(URI(CONCAT(STR(?this), '#MF_01666a10')) AS ?annotation10) .
BIND(URI(CONCAT(STR(?this), '#MF_01666a12')) AS ?annotation12) .
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch29 faldo:location ?templateMotifSequenceMatchRegionP7591330 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP7591332 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarP75913MF_0166625 .
?templateMotifSequenceMatchRegionP7591330 faldo:begin ?templateMotifSequenceMatchBeginP7591331 .
?templateMotifSequenceMatchBeginP7591331 faldo:position ?templateMotifSequenceMatchBeginPositionP7591326 ;
faldo:reference isoform:P75913-1 .
?templateMotifSequenceProfileAlignmentOperationP7591332 edam:has_input signature:MF_01666 ;
rdf:type edam:operation_0300 .
?targetMotifMatch33 faldo:location ?targetMotifMatchRegionMatch34 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_0166636 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarP75913MF_0166627 .
?targetMotifMatchRegionMatch34 faldo:begin ?targetMotifMatchRegionMatchBeginMF_0166635 .
?targetMotifMatchRegionMatchBeginMF_0166635 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0166628 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_0166636 edam:has_input signature:MF_01666 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP75913MF_0166625, 1, (STRLEN(?templateMotifCigarP75913MF_0166625) - STRLEN(REPLACE(?templateMotifCigarP75913MF_0166625, CONCAT('^(?:-*[^-]){', STR(((227 - ?templateMotifSequenceMatchBeginPositionP7591326) + 1)), '}'), '')))), '[a-z]', '')) AS ?step137) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP75913MF_0166627, 1, (STRLEN(?targetMotifMatchCigarP75913MF_0166627) - STRLEN(REPLACE(?targetMotifMatchCigarP75913MF_0166627, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step137), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP75913MF_0166627, 1, (STRLEN(?targetMotifMatchCigarP75913MF_0166627) - STRLEN(REPLACE(?targetMotifMatchCigarP75913MF_0166627, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step137), '}'), '')))), '[^-]', ''))) AS ?step238) .
BIND(((?step238 + ?targetMotifMatchRegionMatchBeginPositionMF_0166628) - 1) AS ?thisPositionOn17) .
BIND(?thisPositionOn17 AS ?thisPositionOn18) .
BIND(?this AS ?pfs1t39) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn17))) AS ?pfsb15) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn18))) AS ?pfse16) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn17, 1) = 'R')) .
BIND(URI(CONCAT(STR(?this), '#MF_01666a14')) AS ?annotation14) .
BIND(?this AS ?pfs13) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch44 faldo:location ?templateMotifSequenceMatchRegionP7591345 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP7591347 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarP75913MF_0166640 .
?templateMotifSequenceMatchRegionP7591345 faldo:begin ?templateMotifSequenceMatchBeginP7591346 .
?templateMotifSequenceMatchBeginP7591346 faldo:position ?templateMotifSequenceMatchBeginPositionP7591341 ;
faldo:reference isoform:P75913-1 .
?templateMotifSequenceProfileAlignmentOperationP7591347 edam:has_input signature:MF_01666 ;
rdf:type edam:operation_0300 .
?targetMotifMatch48 faldo:location ?targetMotifMatchRegionMatch49 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_0166651 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarP75913MF_0166642 .
?targetMotifMatchRegionMatch49 faldo:begin ?targetMotifMatchRegionMatchBeginMF_0166650 .
?targetMotifMatchRegionMatchBeginMF_0166650 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0166643 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_0166651 edam:has_input signature:MF_01666 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP75913MF_0166640, 1, (STRLEN(?templateMotifCigarP75913MF_0166640) - STRLEN(REPLACE(?templateMotifCigarP75913MF_0166640, CONCAT('^(?:-*[^-]){', STR(((275 - ?templateMotifSequenceMatchBeginPositionP7591341) + 1)), '}'), '')))), '[a-z]', '')) AS ?step152) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP75913MF_0166642, 1, (STRLEN(?targetMotifMatchCigarP75913MF_0166642) - STRLEN(REPLACE(?targetMotifMatchCigarP75913MF_0166642, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step152), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP75913MF_0166642, 1, (STRLEN(?targetMotifMatchCigarP75913MF_0166642) - STRLEN(REPLACE(?targetMotifMatchCigarP75913MF_0166642, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step152), '}'), '')))), '[^-]', ''))) AS ?step253) .
BIND(((?step253 + ?targetMotifMatchRegionMatchBeginPositionMF_0166643) - 1) AS ?thisPositionOn23) .
BIND(?thisPositionOn23 AS ?thisPositionOn24) .
BIND(?this AS ?pfs1t54) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn23))) AS ?pfsb21) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn24))) AS ?pfse22) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn23, 1) = 'H')) .
BIND(URI(CONCAT(STR(?this), '#MF_01666a20')) AS ?annotation20) .
BIND(?this AS ?pfs19) .
}
}
"xsd:string |
| http://purl.uniprot.org/unirules/MF_01666 | http://www.w3.org/ns/shacl#rule | http://purl.uniprot.org/unirules/MF_01666#construct |
