| http://purl.uniprot.org/unirules/MF_01686#construct | http://www.w3.org/ns/shacl#construct | "CONSTRUCT {
_:615982 up:source unirule:MF_01686 .
_:615983 up:source unirule:MF_01686 .
_:615984 up:source unirule:MF_01686 .
_:615985 up:source unirule:MF_01686 .
_:615986 up:source unirule:MF_01686 .
_:615987 up:source unirule:MF_01686 .
_:615988 up:source unirule:MF_01686 .
_:615989 up:source unirule:MF_01686 .
_:615990 up:source unirule:MF_01686 .
_:615991 up:source unirule:MF_01686 .
_:615992 up:source unirule:MF_01686 .
_:615993 up:source unirule:MF_01686 .
_:615994 up:source unirule:MF_01686 .
_:615995 up:source unirule:MF_01686 .
_:615996 up:source unirule:MF_01686 .
_:615997 up:source unirule:MF_01686 .
?this up:annotation ?annotation2 ,
?annotation3 ,
?annotation4 ,
?annotation5 ,
?annotation7 ;
up:classifiedWith GO:0004799 ,
GO:0005737 ,
GO:0006231 ,
GO:0006235 ,
keyword:489 ,
keyword:545 ,
keyword:808 ,
keyword:963 ;
up:recommendedName ?name0 .
?name0 up:ecName '2.1.1.-' ;
up:fullName 'Putative thymidylate synthase' ;
up:shortName 'TS' ,
'TSase' ;
rdf:type up:Structured_Name .
?gene1 skos:prefLabel 'thyA' .
?annotation2 a up:Function_Annotation ;
rdfs:comment 'May catalyze the biosynthesis of dTMP using an unknown cosubstrate.' .
?annotation3 a up:Pathway_Annotation ;
rdfs:comment 'Pyrimidine metabolism; dTTP biosynthesis.' .
?annotation4 a up:Subunit_Annotation ;
rdfs:comment 'Monomer.' .
?annotation5 a up:Subcellular_Location_Annotation .
?annotation5li6 up:cellularComponent .
?annotation7 a up:Similarity_Annotation ;
rdfs:comment 'Belongs to the thymidylate synthase family. Archaeal-type ThyA subfamily.' .
?pfs8 up:annotation ?annotation9 .
?annotation9 faldo:begin ?pfsb10 ;
faldo:end ?pfse11 ;
rdf:type up:Active_Site_Annotation .
?pfsb10 faldo:position ?thisPositionOn12 ;
rdf:type faldo:ExactPosition .
?pfse11 faldo:position ?thisPositionOn13 ;
rdf:type faldo:ExactPosition .
_:615998 a rdf:Statement ;
up:attribution _:615982 ;
rdf:subject ?this ;
rdf:predicate up:recommendedName ;
rdf:object ?name0 .
_:615999 a rdf:Statement ;
up:attribution _:615983 ;
rdf:subject ?gene1 ;
rdf:predicate up:encodedBy ;
rdf:object ?gene1 .
_:616000 a rdf:Statement ;
up:attribution _:615984 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation2 .
_:616001 a rdf:Statement ;
up:attribution _:615985 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation3 .
_:616002 a rdf:Statement ;
up:attribution _:615986 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation4 .
_:616003 a rdf:Statement ;
up:attribution _:615987 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation5 .
_:616004 a rdf:Statement ;
up:attribution _:615988 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation7 .
_:616005 a rdf:Statement ;
up:attribution _:615989 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:963 .
_:616006 a rdf:Statement ;
up:attribution _:615990 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:489 .
_:616007 a rdf:Statement ;
up:attribution _:615991 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:545 .
_:616008 a rdf:Statement ;
up:attribution _:615992 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:808 .
_:616009 a rdf:Statement ;
up:attribution _:615993 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0004799 .
_:616010 a rdf:Statement ;
up:attribution _:615994 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0006231 .
_:616011 a rdf:Statement ;
up:attribution _:615995 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0006235 .
_:616012 a rdf:Statement ;
up:attribution _:615996 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0005737 .
_:616013 a rdf:Statement ;
up:source unirule:MF_01686 ;
rdf:subject ?pfs8 ;
rdf:predicate up:annotation ;
rdf:object ?annotation9 .
_:616014 a rdf:Statement ;
up:attribution _:615997 ;
rdf:subject ?pfs8 ;
rdf:predicate up:annotation ;
rdf:object ?annotation9 .
}
WHERE {
#baseURI: http://purl.uniprot.org/unirule/MF_01686
#Rule MF_01686 Created by:? on:2009-01-30 Modified by:Catherine Rivoire on:2024-01-31
?this up:organism ?thisOrganism ;
rdfs:seeAlso signature:MF_01686 .
?thisOrganism rdfs:subClassOf+ taxon:2157 .
BIND(URI(CONCAT(STR(?this), '#MF_01686a0')) AS ?name0) .
BIND(URI(CONCAT(STR(?this), '#MF_01686a2')) AS ?annotation2) .
BIND(URI(CONCAT(STR(?this), '#MF_01686a3')) AS ?annotation3) .
BIND(URI(CONCAT(STR(?this), '#MF_01686a4')) AS ?annotation4) .
BIND(URI(CONCAT(STR(?this), '#MF_01686a5')) AS ?annotation5) .
BIND(URI(CONCAT(STR(?this), '#MF_01686a7')) AS ?annotation7) .
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch18 faldo:location ?templateMotifSequenceMatchRegionP8030519 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP8030521 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarP80305MF_0168614 .
?templateMotifSequenceMatchRegionP8030519 faldo:begin ?templateMotifSequenceMatchBeginP8030520 .
?templateMotifSequenceMatchBeginP8030520 faldo:position ?templateMotifSequenceMatchBeginPositionP8030515 ;
faldo:reference isoform:P80305-1 .
?templateMotifSequenceProfileAlignmentOperationP8030521 edam:has_input signature:MF_01686 ;
rdf:type edam:operation_0300 .
?targetMotifMatch22 faldo:location ?targetMotifMatchRegionMatch23 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_0168625 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarP80305MF_0168616 .
?targetMotifMatchRegionMatch23 faldo:begin ?targetMotifMatchRegionMatchBeginMF_0168624 .
?targetMotifMatchRegionMatchBeginMF_0168624 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0168617 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_0168625 edam:has_input signature:MF_01686 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP80305MF_0168614, 1, (STRLEN(?templateMotifCigarP80305MF_0168614) - STRLEN(REPLACE(?templateMotifCigarP80305MF_0168614, CONCAT('^(?:-*[^-]){', STR(((146 - ?templateMotifSequenceMatchBeginPositionP8030515) + 1)), '}'), '')))), '[a-z]', '')) AS ?step126) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP80305MF_0168616, 1, (STRLEN(?targetMotifMatchCigarP80305MF_0168616) - STRLEN(REPLACE(?targetMotifMatchCigarP80305MF_0168616, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step126), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP80305MF_0168616, 1, (STRLEN(?targetMotifMatchCigarP80305MF_0168616) - STRLEN(REPLACE(?targetMotifMatchCigarP80305MF_0168616, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step126), '}'), '')))), '[^-]', ''))) AS ?step227) .
BIND(((?step227 + ?targetMotifMatchRegionMatchBeginPositionMF_0168617) - 1) AS ?thisPositionOn12) .
BIND(?thisPositionOn12 AS ?thisPositionOn13) .
BIND(?this AS ?pfs1t28) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn12))) AS ?pfsb10) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn13))) AS ?pfse11) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn12, 1) = 'C')) .
BIND(URI(CONCAT(STR(?this), '#MF_01686a9')) AS ?annotation9) .
BIND(?this AS ?pfs8) .
}
}
"xsd:string |
