| http://purl.uniprot.org/unirules/MF_01689#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01689#construct-template-46 |
| http://purl.uniprot.org/unirules/MF_01689#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01689#construct-template-56 |
| http://purl.uniprot.org/unirules/MF_01689#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01689#construct-template-45 |
| http://purl.uniprot.org/unirules/MF_01689#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01689#construct-template-77 |
| http://purl.uniprot.org/unirules/MF_01689#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01689#construct-template-73 |
| http://purl.uniprot.org/unirules/MF_01689#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01689#construct-template-2 |
| http://purl.uniprot.org/unirules/MF_01689#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01689#construct-template-83 |
| http://purl.uniprot.org/unirules/MF_01689#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01689#construct-template-62 |
| http://purl.uniprot.org/unirules/MF_01689#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01689#construct-template-71 |
| http://purl.uniprot.org/unirules/MF_01689#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01689#construct-template-72 |
| http://purl.uniprot.org/unirules/MF_01689#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01689#construct-template-22 |
| http://purl.uniprot.org/unirules/MF_01689#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01689#construct-template-70 |
| http://purl.uniprot.org/unirules/MF_01689#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01689#construct-template-81 |
| http://purl.uniprot.org/unirules/MF_01689#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01689#construct-template-90 |
| http://purl.uniprot.org/unirules/MF_01689#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01689#construct-template-66 |
| http://purl.uniprot.org/unirules/MF_01689#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01689#construct-template-88 |
| http://purl.uniprot.org/unirules/MF_01689#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01689#construct-template-86 |
| http://purl.uniprot.org/unirules/MF_01689#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01689#construct-template-84 |
| http://purl.uniprot.org/unirules/MF_01689#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01689#construct-template-82 |
| http://purl.uniprot.org/unirules/MF_01689#construct | http://www.w3.org/ns/shacl#prefixes | http://purl.uniprot.org/unirules/ |
| http://purl.uniprot.org/unirules/MF_01689#construct | http://spinrdf.org/sp#where | http://purl.uniprot.org/unirules/MF_01689#construct-where-list-0 |
| http://purl.uniprot.org/unirules/MF_01689#construct | http://spinrdf.org/sp#templates | http://purl.uniprot.org/unirules/MF_01689#construct-template-list-0 |
| http://purl.uniprot.org/unirules/MF_01689#construct | http://www.w3.org/ns/shacl#construct | "CONSTRUCT {
_:617515 up:source unirule:MF_01689 .
_:617516 up:source unirule:MF_01689 .
_:617517 up:source unirule:MF_01689 .
_:617518 up:source unirule:MF_01689 .
_:617519 up:source unirule:MF_01689 .
_:617520 up:source unirule:MF_01689 .
_:617521 up:source unirule:MF_01689 .
_:617522 up:source unirule:MF_01689 .
_:617523 up:source unirule:MF_01689 .
_:617524 up:source unirule:MF_01689 .
_:617525 up:source unirule:MF_01689 .
_:617526 up:source unirule:MF_01689 .
_:617527 up:source unirule:MF_01689 .
_:617528 up:source unirule:MF_01689 .
_:617529 up:source unirule:MF_01689 .
_:617530 up:source unirule:MF_01689 .
_:617531 up:source unirule:MF_01689 .
_:617532 up:source unirule:MF_01689 .
_:617533 up:source unirule:MF_01689 .
_:617534 up:source unirule:MF_01689 .
_:617535 up:source unirule:MF_01689 .
?this up:alternativeName ?name1 ;
up:annotation ?annotation3 ,
?annotation4 ,
?annotation6 ,
?annotation7 ,
?annotation8 ,
?annotation10 ;
up:classifiedWith GO:0004587 ,
GO:0005737 ,
GO:0008483 ,
GO:0030170 ,
GO:0055129 ,
keyword:28 ,
keyword:32 ,
keyword:641 ,
keyword:663 ,
keyword:808 ,
keyword:963 ;
up:recommendedName ?name0 .
?name0 up:ecName '2.6.1.13' ;
up:fullName 'Ornithine aminotransferase' ;
up:shortName 'OAT' ;
rdf:type up:Structured_Name .
?name1 up:fullName 'Ornithine--oxo-acid aminotransferase' ;
rdf:type up:Structured_Name .
?gene2 skos:prefLabel 'rocD' .
?annotation3 a up:Function_Annotation ;
rdfs:comment 'Catalyzes the interconversion of ornithine to glutamate semialdehyde.' .
?annotation4 up:activity ?activity5 ;
rdf:type up:Catalytic_Activity_Annotation .
?activity5 up:catalyticActivity ;
up:enzymeClass .
?annotation6 up:cofactor chebi:597326 ;
rdf:type up:Cofactor_Annotation .
?annotation7 a up:Pathway_Annotation ;
rdfs:comment 'Amino-acid biosynthesis; L-proline biosynthesis; L-glutamate 5-semialdehyde from L-ornithine: step 1/1.' .
?annotation8 a up:Subcellular_Location_Annotation .
?annotation8li9 up:cellularComponent .
?annotation10 a up:Similarity_Annotation ;
rdfs:comment 'Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. OAT subfamily.' .
?pfs11 up:annotation ?annotation12 .
?annotation12 faldo:begin ?pfsb13 ;
faldo:end ?pfse14 ;
rdf:type up:Modified_Residue_Annotation ;
rdfs:comment 'N6-(pyridoxal phosphate)lysine' .
?pfsb13 faldo:position ?thisPositionOn15 ;
rdf:type faldo:ExactPosition .
?pfse14 faldo:position ?thisPositionOn16 ;
rdf:type faldo:ExactPosition .
_:617536 a rdf:Statement ;
up:attribution _:617515 ;
rdf:subject ?this ;
rdf:predicate up:recommendedName ;
rdf:object ?name0 .
_:617537 a rdf:Statement ;
up:attribution _:617516 ;
rdf:subject ?this ;
rdf:predicate up:alternativeName ;
rdf:object ?name1 .
_:617538 a rdf:Statement ;
up:attribution _:617517 ;
rdf:subject ?gene2 ;
rdf:predicate up:encodedBy ;
rdf:object ?gene2 .
_:617539 a rdf:Statement ;
up:attribution _:617518 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation3 .
_:617540 a rdf:Statement ;
up:attribution _:617519 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation4 .
_:617541 a rdf:Statement ;
up:attribution _:617520 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation6 .
_:617542 a rdf:Statement ;
up:attribution _:617521 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation7 .
_:617543 a rdf:Statement ;
up:attribution _:617522 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation8 .
_:617544 a rdf:Statement ;
up:attribution _:617523 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation10 .
_:617545 a rdf:Statement ;
up:attribution _:617524 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:28 .
_:617546 a rdf:Statement ;
up:attribution _:617525 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:32 .
_:617547 a rdf:Statement ;
up:attribution _:617526 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:963 .
_:617548 a rdf:Statement ;
up:attribution _:617527 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:641 .
_:617549 a rdf:Statement ;
up:attribution _:617528 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:663 .
_:617550 a rdf:Statement ;
up:attribution _:617529 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:808 .
_:617551 a rdf:Statement ;
up:attribution _:617530 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0004587 .
_:617552 a rdf:Statement ;
up:attribution _:617531 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0008483 .
_:617553 a rdf:Statement ;
up:attribution _:617532 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0030170 .
_:617554 a rdf:Statement ;
up:attribution _:617533 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0055129 .
_:617555 a rdf:Statement ;
up:attribution _:617534 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0005737 .
_:617556 a rdf:Statement ;
up:source unirule:MF_01689 ;
rdf:subject ?pfs11 ;
rdf:predicate up:annotation ;
rdf:object ?annotation12 .
_:617557 a rdf:Statement ;
up:attribution _:617535 ;
rdf:subject ?pfs11 ;
rdf:predicate up:annotation ;
rdf:object ?annotation12 .
}
WHERE {
#baseURI: http://purl.uniprot.org/unirule/MF_01689
#Rule MF_01689 Created by:? on:2009-04-01 Modified by:Edouard de Castro on:2024-09-03
?this up:organism ?thisOrganism ;
rdfs:seeAlso signature:MF_01689 .
?thisOrganism rdfs:subClassOf+ taxon:2 .
BIND(URI(CONCAT(STR(?this), '#MF_01689a0')) AS ?name0) .
BIND(URI(CONCAT(STR(?this), '#MF_01689a1')) AS ?name1) .
BIND(URI(CONCAT(STR(?this), '#MF_01689a3')) AS ?annotation3) .
BIND(URI(CONCAT(STR(?this), '#MF_01689a4')) AS ?annotation4) .
BIND(URI(CONCAT(STR(?this), '#MF_01689a6')) AS ?annotation6) .
BIND(URI(CONCAT(STR(?this), '#MF_01689a7')) AS ?annotation7) .
BIND(URI(CONCAT(STR(?this), '#MF_01689a8')) AS ?annotation8) .
BIND(URI(CONCAT(STR(?this), '#MF_01689a10')) AS ?annotation10) .
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch21 faldo:location ?templateMotifSequenceMatchRegionP3802122 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP3802124 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarP38021MF_0168917 .
?templateMotifSequenceMatchRegionP3802122 faldo:begin ?templateMotifSequenceMatchBeginP3802123 .
?templateMotifSequenceMatchBeginP3802123 faldo:position ?templateMotifSequenceMatchBeginPositionP3802118 ;
faldo:reference isoform:P38021-1 .
?templateMotifSequenceProfileAlignmentOperationP3802124 edam:has_input signature:MF_01689 ;
rdf:type edam:operation_0300 .
?targetMotifMatch25 faldo:location ?targetMotifMatchRegionMatch26 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_0168928 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarP38021MF_0168919 .
?targetMotifMatchRegionMatch26 faldo:begin ?targetMotifMatchRegionMatchBeginMF_0168927 .
?targetMotifMatchRegionMatchBeginMF_0168927 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0168920 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_0168928 edam:has_input signature:MF_01689 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP38021MF_0168917, 1, (STRLEN(?templateMotifCigarP38021MF_0168917) - STRLEN(REPLACE(?templateMotifCigarP38021MF_0168917, CONCAT('^(?:-*[^-]){', STR(((258 - ?templateMotifSequenceMatchBeginPositionP3802118) + 1)), '}'), '')))), '[a-z]', '')) AS ?step129) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP38021MF_0168919, 1, (STRLEN(?targetMotifMatchCigarP38021MF_0168919) - STRLEN(REPLACE(?targetMotifMatchCigarP38021MF_0168919, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step129), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP38021MF_0168919, 1, (STRLEN(?targetMotifMatchCigarP38021MF_0168919) - STRLEN(REPLACE(?targetMotifMatchCigarP38021MF_0168919, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step129), '}'), '')))), '[^-]', ''))) AS ?step230) .
BIND(((?step230 + ?targetMotifMatchRegionMatchBeginPositionMF_0168920) - 1) AS ?thisPositionOn15) .
BIND(?thisPositionOn15 AS ?thisPositionOn16) .
BIND(?this AS ?pfs1t31) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn15))) AS ?pfsb13) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn16))) AS ?pfse14) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn15, 1) = 'K')) .
BIND(URI(CONCAT(STR(?this), '#MF_01689a12')) AS ?annotation12) .
BIND(?this AS ?pfs11) .
}
}
"xsd:string |
| http://purl.uniprot.org/unirules/MF_01689 | http://www.w3.org/ns/shacl#rule | http://purl.uniprot.org/unirules/MF_01689#construct |
