| http://purl.uniprot.org/unirules/MF_01803#construct | http://www.w3.org/ns/shacl#construct | "CONSTRUCT {
_:632473 up:source unirule:MF_01803 .
_:632474 up:source unirule:MF_01803 .
_:632475 up:source unirule:MF_01803 .
_:632476 up:source unirule:MF_01803 .
_:632477 up:source unirule:MF_01803 .
_:632478 up:source unirule:MF_01803 .
_:632479 up:source unirule:MF_01803 .
_:632480 up:source unirule:MF_01803 .
_:632481 up:source unirule:MF_01803 .
_:632482 up:source unirule:MF_01803 .
_:632483 up:source unirule:MF_01803 .
_:632484 up:source unirule:MF_01803 .
_:632485 up:source unirule:MF_01803 .
_:632486 up:source unirule:MF_01803 .
_:632487 up:source unirule:MF_01803 .
_:632488 up:source unirule:MF_01803 .
_:632489 up:source unirule:MF_01803 .
?this up:annotation ?annotation2 ,
?annotation3 ,
?annotation4 ,
?annotation6 ;
up:classifiedWith GO:0005509 ,
GO:0005737 ,
GO:0006260 ,
GO:0007059 ,
keyword:106 ,
keyword:131 ,
keyword:132 ,
keyword:159 ,
keyword:226 ,
keyword:963 ;
up:recommendedName ?name0 .
?name0 up:fullName 'Chromosome partition protein MukF' ;
rdf:type up:Structured_Name .
?gene1 skos:prefLabel 'mukF' .
?annotation2 a up:Function_Annotation ;
rdfs:comment 'Involved in chromosome condensation, segregation and cell cycle progression. May participate in facilitating chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division. Not required for mini-F plasmid partitioning. Probably acts via its interaction with MukB and MukE. Overexpression results in anucleate cells. It has a calcium binding activity.' .
?annotation3 a up:Subunit_Annotation ;
rdfs:comment 'Interacts, and probably forms a ternary complex, with MukE and MukB via its C-terminal region. The complex formation is stimulated by calcium or magnesium. It is required for an interaction between MukE and MukB.' .
?annotation4 a up:Subcellular_Location_Annotation ;
rdfs:comment 'Restricted to the nucleoid region' .
?annotation4li5 up:cellularComponent .
?annotation6 a up:Similarity_Annotation ;
rdfs:comment 'Belongs to the MukF family.' .
?pfs7 up:annotation ?annotation8 .
?annotation8 faldo:begin ?pfsb9 ;
faldo:end ?pfse10 ;
rdf:type up:Region_Annotation ;
rdfs:comment 'Leucine-zipper' .
?pfsb9 faldo:position ?thisPositionOn11 ;
rdf:type faldo:ExactPosition .
?pfse10 faldo:position ?thisPositionOn12 ;
rdf:type faldo:ExactPosition .
_:632490 a rdf:Statement ;
up:attribution _:632473 ;
rdf:subject ?this ;
rdf:predicate up:recommendedName ;
rdf:object ?name0 .
_:632491 a rdf:Statement ;
up:attribution _:632474 ;
rdf:subject ?gene1 ;
rdf:predicate up:encodedBy ;
rdf:object ?gene1 .
_:632492 a rdf:Statement ;
up:attribution _:632475 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation2 .
_:632493 a rdf:Statement ;
up:attribution _:632476 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation3 .
_:632494 a rdf:Statement ;
up:attribution _:632477 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation4 .
_:632495 a rdf:Statement ;
up:attribution _:632478 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation6 .
_:632496 a rdf:Statement ;
up:attribution _:632479 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:963 .
_:632497 a rdf:Statement ;
up:attribution _:632480 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:131 .
_:632498 a rdf:Statement ;
up:attribution _:632481 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:132 .
_:632499 a rdf:Statement ;
up:attribution _:632482 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:159 .
_:632500 a rdf:Statement ;
up:attribution _:632483 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:226 .
_:632501 a rdf:Statement ;
up:attribution _:632484 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:106 .
_:632502 a rdf:Statement ;
up:attribution _:632485 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0005737 .
_:632503 a rdf:Statement ;
up:attribution _:632486 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0006260 .
_:632504 a rdf:Statement ;
up:attribution _:632487 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0007059 .
_:632505 a rdf:Statement ;
up:attribution _:632488 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0005509 .
_:632506 a rdf:Statement ;
up:source unirule:MF_01803 ;
rdf:subject ?pfs7 ;
rdf:predicate up:annotation ;
rdf:object ?annotation8 .
_:632507 a rdf:Statement ;
up:attribution _:632489 ;
rdf:subject ?pfs7 ;
rdf:predicate up:annotation ;
rdf:object ?annotation8 .
}
WHERE {
#baseURI: http://purl.uniprot.org/unirule/MF_01803
#Rule MF_01803 Created by:? on:2005-02-28 Modified by:Edouard de Castro on:2019-11-19
?this up:organism ?thisOrganism ;
rdfs:seeAlso signature:MF_01803 .
?thisOrganism rdfs:subClassOf+ taxon:1236 .
BIND(URI(CONCAT(STR(?this), '#MF_01803a0')) AS ?name0) .
BIND(URI(CONCAT(STR(?this), '#MF_01803a2')) AS ?annotation2) .
BIND(URI(CONCAT(STR(?this), '#MF_01803a3')) AS ?annotation3) .
BIND(URI(CONCAT(STR(?this), '#MF_01803a4')) AS ?annotation4) .
BIND(URI(CONCAT(STR(?this), '#MF_01803a6')) AS ?annotation6) .
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch17 faldo:location ?templateMotifSequenceMatchRegionP6029318 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP6029320 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarP60293MF_0180313 .
?templateMotifSequenceMatchRegionP6029318 faldo:begin ?templateMotifSequenceMatchBeginP6029319 .
?templateMotifSequenceMatchBeginP6029319 faldo:position ?templateMotifSequenceMatchBeginPositionP6029314 ;
faldo:reference isoform:P60293-1 .
?templateMotifSequenceProfileAlignmentOperationP6029320 edam:has_input signature:MF_01803 ;
rdf:type edam:operation_0300 .
?targetMotifMatch21 faldo:location ?targetMotifMatchRegionMatch22 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_0180324 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarP60293MF_0180315 .
?targetMotifMatchRegionMatch22 faldo:begin ?targetMotifMatchRegionMatchBeginMF_0180323 .
?targetMotifMatchRegionMatchBeginMF_0180323 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0180316 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_0180324 edam:has_input signature:MF_01803 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP60293MF_0180313, 1, (STRLEN(?templateMotifCigarP60293MF_0180313) - STRLEN(REPLACE(?templateMotifCigarP60293MF_0180313, CONCAT('^(?:-*[^-]){', STR(((208 - ?templateMotifSequenceMatchBeginPositionP6029314) + 1)), '}'), '')))), '[a-z]', '')) AS ?step125) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP60293MF_0180315, 1, (STRLEN(?targetMotifMatchCigarP60293MF_0180315) - STRLEN(REPLACE(?targetMotifMatchCigarP60293MF_0180315, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step125), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP60293MF_0180315, 1, (STRLEN(?targetMotifMatchCigarP60293MF_0180315) - STRLEN(REPLACE(?targetMotifMatchCigarP60293MF_0180315, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step125), '}'), '')))), '[^-]', ''))) AS ?step226) .
BIND(((?step226 + ?targetMotifMatchRegionMatchBeginPositionMF_0180316) - 1) AS ?thisPositionOn11) .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP60293MF_0180313, 1, (STRLEN(?templateMotifCigarP60293MF_0180313) - STRLEN(REPLACE(?templateMotifCigarP60293MF_0180313, CONCAT('^(?:-*[^-]){', STR(((236 - ?templateMotifSequenceMatchBeginPositionP6029314) + 1)), '}'), '')))), '[a-z]', '')) AS ?step127) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP60293MF_0180315, 1, (STRLEN(?targetMotifMatchCigarP60293MF_0180315) - STRLEN(REPLACE(?targetMotifMatchCigarP60293MF_0180315, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step127), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP60293MF_0180315, 1, (STRLEN(?targetMotifMatchCigarP60293MF_0180315) - STRLEN(REPLACE(?targetMotifMatchCigarP60293MF_0180315, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step127), '}'), '')))), '[^-]', ''))) AS ?step228) .
BIND(((?step228 + ?targetMotifMatchRegionMatchBeginPositionMF_0180316) - 1) AS ?thisPositionOn12) .
BIND(?this AS ?pfs1t29) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn11))) AS ?pfsb9) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn12))) AS ?pfse10) .
FILTER (REGEX('L[ARNDCQEGHILKMFPSTWYVBZJUOX]{6)L[ARNDCQEGHILKMFPSTWYVBZJUOX]{6)L[ARNDCQEGHILKMFPSTWYVBZJUOX]{6)L[ARNDCQEGHILKMFPSTWYVBZJUOX]{6)[LI]', SUBSTR(?thisSequenceValue, ?thisPositionOn11, (?thisPositionOn12 - ?thisPositionOn11)))) .
BIND(URI(CONCAT(STR(?this), '#MF_01803a8')) AS ?annotation8) .
BIND(?this AS ?pfs7) .
}
}
"xsd:string |
