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http://purl.uniprot.org/unirules/MF_02112#constructhttps://hamap.expasy.org/rdf/vocab#addsTriplehttp://purl.uniprot.org/unirules/MF_02112#construct-template-39
http://purl.uniprot.org/unirules/MF_02112#constructhttp://www.w3.org/ns/shacl#prefixeshttp://purl.uniprot.org/unirules/
http://purl.uniprot.org/unirules/MF_02112#constructhttp://spinrdf.org/sp#wherehttp://purl.uniprot.org/unirules/MF_02112#construct-where-list-0
http://purl.uniprot.org/unirules/MF_02112#constructhttp://spinrdf.org/sp#templateshttp://purl.uniprot.org/unirules/MF_02112#construct-template-list-0
http://purl.uniprot.org/unirules/MF_02112#constructhttp://www.w3.org/ns/shacl#construct"CONSTRUCT { _:749055 up:source unirule:MF_02112 . _:749056 up:source unirule:MF_02112 . _:749057 up:source unirule:MF_02112 . _:749058 up:source unirule:MF_02112 . _:749059 up:source unirule:MF_02112 . _:749060 up:source unirule:MF_02112 . _:749061 up:source unirule:MF_02112 . _:749062 up:source unirule:MF_02112 . _:749063 up:source unirule:MF_02112 . _:749064 up:source unirule:MF_02112 . _:749065 up:source unirule:MF_02112 . _:749066 up:source unirule:MF_02112 . _:749067 up:source unirule:MF_02112 . _:749068 up:source unirule:MF_02112 . _:749069 up:source unirule:MF_02112 . _:749070 up:source unirule:MF_02112 . ?this up:annotation ?annotation0 ; up:classifiedWith GO:0005524 , GO:0016887 , keyword:547 , keyword:67 . ?annotation0 a up:Similarity_Annotation ; rdfs:comment 'Belongs to the AAA ATPase family.' . ?case1 up:classifiedWith GO:0000502 , GO:0010498 , GO:0019941 , GO:0022623 , GO:0032182 , GO:0043335 , keyword:143 , keyword:647 . ?pfs5 up:annotation ?annotation6 . ?annotation6 faldo:begin ?pfsb7 ; faldo:end ?pfse8 ; rdf:type up:Region_Annotation ; rdfs:comment 'Docks into pockets in the proteasome alpha-ring' . ?pfsb7 faldo:position ?thisPositionOn9 ; rdf:type faldo:ExactPosition . ?pfse8 faldo:position ?thisPositionOn10 ; rdf:type faldo:ExactPosition . ?pfs11 up:annotation ?annotation12 . ?annotation12 faldo:begin ?pfsb13 ; faldo:end ?pfse14 ; up:ligand ?ligand15 ; rdf:type up:Binding_Site_Annotation . ?pfsb13 faldo:position ?thisPositionOn16 ; rdf:type faldo:ExactPosition . ?pfse14 faldo:position ?thisPositionOn17 ; rdf:type faldo:ExactPosition . ?ligand15 rdfs:subClassOf chebi:30616 . ?sam18 up:classifiedWith keyword:175 . ?coiledCoil19 faldo:begin ?coiledCoilb20 ; faldo:end ?coiledCoile21 . ?coiledCoilb20 faldo:position ?coiledCoilbp22 . ?coiledCoile21 faldo:position ?coiledCoilep23 . ?keyword24 up:range ?coiledCoil19 . _:749071 a rdf:Statement ; up:attribution _:749055 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation0 . _:749072 a rdf:Statement ; up:attribution _:749056 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:67 . _:749073 a rdf:Statement ; up:attribution _:749057 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:547 . _:749074 a rdf:Statement ; up:attribution _:749058 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0005524 . _:749075 a rdf:Statement ; up:attribution _:749059 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0016887 . _:749076 a rdf:Statement ; up:attribution _:749060 ; rdf:subject ?case1 ; rdf:predicate up:classifiedWith ; rdf:object keyword:143 . _:749077 a rdf:Statement ; up:attribution _:749061 ; rdf:subject ?case1 ; rdf:predicate up:classifiedWith ; rdf:object keyword:647 . _:749078 a rdf:Statement ; up:attribution _:749062 ; rdf:subject ?case1 ; rdf:predicate up:classifiedWith ; rdf:object GO:0032182 . _:749079 a rdf:Statement ; up:attribution _:749063 ; rdf:subject ?case1 ; rdf:predicate up:classifiedWith ; rdf:object GO:0010498 . _:749080 a rdf:Statement ; up:attribution _:749064 ; rdf:subject ?case1 ; rdf:predicate up:classifiedWith ; rdf:object GO:0019941 . _:749081 a rdf:Statement ; up:attribution _:749065 ; rdf:subject ?case1 ; rdf:predicate up:classifiedWith ; rdf:object GO:0043335 . _:749082 a rdf:Statement ; up:attribution _:749066 ; rdf:subject ?case1 ; rdf:predicate up:classifiedWith ; rdf:object GO:0000502 . _:749083 a rdf:Statement ; up:attribution _:749067 ; rdf:subject ?case1 ; rdf:predicate up:classifiedWith ; rdf:object GO:0022623 . _:749084 a rdf:Statement ; up:source unirule:MF_02112 ; rdf:subject ?pfs5 ; rdf:predicate up:annotation ; rdf:object ?annotation6 . _:749085 a rdf:Statement ; up:attribution _:749068 ; rdf:subject ?pfs5 ; rdf:predicate up:annotation ; rdf:object ?annotation6 . _:749086 a rdf:Statement ; up:source unirule:MF_02112 ; rdf:subject ?pfs11 ; rdf:predicate up:annotation ; rdf:object ?annotation12 . _:749087 a rdf:Statement ; up:attribution _:749069 ; rdf:subject ?pfs11 ; rdf:predicate up:annotation ; rdf:object ?annotation12 . _:749088 a rdf:Statement ; up:attribution _:749070 ; rdf:subject ?sam18 ; rdf:predicate up:classifiedWith ; rdf:object keyword:175 . } WHERE { #baseURI: http://purl.uniprot.org/unirule/MF_02112 #Rule MF_02112 Created by:? on:2010-07-02 Modified by:Edouard de Castro on:2023-06-01 ?this up:organism ?thisOrganism ; rdfs:seeAlso signature:MF_02112 . ?thisOrganism rdfs:subClassOf+ taxon:201174 . BIND(URI(CONCAT(STR(?this), '#MF_02112a0')) AS ?annotation0) . OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch29 faldo:location ?templateMotifSequenceMatchRegionP9WQN530 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP9WQN532 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP9WQN5MF_0211225 . ?templateMotifSequenceMatchRegionP9WQN530 faldo:begin ?templateMotifSequenceMatchBeginP9WQN531 . ?templateMotifSequenceMatchBeginP9WQN531 faldo:position ?templateMotifSequenceMatchBeginPositionP9WQN526 ; faldo:reference isoform:P9WQN5-1 . ?templateMotifSequenceProfileAlignmentOperationP9WQN532 edam:has_input signature:MF_02112 ; rdf:type edam:operation_0300 . ?targetMotifMatch33 faldo:location ?targetMotifMatchRegionMatch34 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_0211236 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP9WQN5MF_0211227 . ?targetMotifMatchRegionMatch34 faldo:begin ?targetMotifMatchRegionMatchBeginMF_0211235 . ?targetMotifMatchRegionMatchBeginMF_0211235 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0211228 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_0211236 edam:has_input signature:MF_02112 ; rdf:type edam:operation_0300 . BIND(?this AS ?tagCterminus) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP9WQN5MF_0211225, 1, (STRLEN(?templateMotifCigarP9WQN5MF_0211225) - STRLEN(REPLACE(?templateMotifCigarP9WQN5MF_0211225, CONCAT('^(?:-*[^-]){', STR(((608 - ?templateMotifSequenceMatchBeginPositionP9WQN526) + 1)), '}'), '')))), '[a-z]', '')) AS ?step137) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP9WQN5MF_0211227, 1, (STRLEN(?targetMotifMatchCigarP9WQN5MF_0211227) - STRLEN(REPLACE(?targetMotifMatchCigarP9WQN5MF_0211227, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step137), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP9WQN5MF_0211227, 1, (STRLEN(?targetMotifMatchCigarP9WQN5MF_0211227) - STRLEN(REPLACE(?targetMotifMatchCigarP9WQN5MF_0211227, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step137), '}'), '')))), '[^-]', ''))) AS ?step238) . BIND(((?step238 + ?targetMotifMatchRegionMatchBeginPositionMF_0211228) - 1) AS ?thisPositionOn9) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP9WQN5MF_0211225, 1, (STRLEN(?templateMotifCigarP9WQN5MF_0211225) - STRLEN(REPLACE(?templateMotifCigarP9WQN5MF_0211225, CONCAT('^(?:-*[^-]){', STR(((609 - ?templateMotifSequenceMatchBeginPositionP9WQN526) + 1)), '}'), '')))), '[a-z]', '')) AS ?step139) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP9WQN5MF_0211227, 1, (STRLEN(?targetMotifMatchCigarP9WQN5MF_0211227) - STRLEN(REPLACE(?targetMotifMatchCigarP9WQN5MF_0211227, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step139), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP9WQN5MF_0211227, 1, (STRLEN(?targetMotifMatchCigarP9WQN5MF_0211227) - STRLEN(REPLACE(?targetMotifMatchCigarP9WQN5MF_0211227, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step139), '}'), '')))), '[^-]', ''))) AS ?step240) . BIND(((?step240 + ?targetMotifMatchRegionMatchBeginPositionMF_0211228) - 1) AS ?thisPositionOn10) . BIND(?this AS ?pfs1t41) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn9))) AS ?pfsb7) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn10))) AS ?pfse8) . FILTER (REGEX('Y[ARNDCQEGHILKMFPSTWYVBZJUOX]', SUBSTR(?thisSequenceValue, ?thisPositionOn9, (?thisPositionOn10 - ?thisPositionOn9)))) . BIND(URI(CONCAT(STR(?this), '#MF_02112a6')) AS ?annotation6) . BIND(?this AS ?pfs5) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch46 faldo:location ?templateMotifSequenceMatchRegionP9WQN547 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP9WQN549 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP9WQN5MF_0211242 . ?templateMotifSequenceMatchRegionP9WQN547 faldo:begin ?templateMotifSequenceMatchBeginP9WQN548 . ?templateMotifSequenceMatchBeginP9WQN548 faldo:position ?templateMotifSequenceMatchBeginPositionP9WQN543 ; faldo:reference isoform:P9WQN5-1 . ?templateMotifSequenceProfileAlignmentOperationP9WQN549 edam:has_input signature:MF_02112 ; rdf:type edam:operation_0300 . ?targetMotifMatch50 faldo:location ?targetMotifMatchRegionMatch51 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_0211253 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP9WQN5MF_0211244 . ?targetMotifMatchRegionMatch51 faldo:begin ?targetMotifMatchRegionMatchBeginMF_0211252 . ?targetMotifMatchRegionMatchBeginMF_0211252 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0211245 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_0211253 edam:has_input signature:MF_02112 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP9WQN5MF_0211242, 1, (STRLEN(?templateMotifCigarP9WQN5MF_0211242) - STRLEN(REPLACE(?templateMotifCigarP9WQN5MF_0211242, CONCAT('^(?:-*[^-]){', STR(((296 - ?templateMotifSequenceMatchBeginPositionP9WQN543) + 1)), '}'), '')))), '[a-z]', '')) AS ?step154) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP9WQN5MF_0211244, 1, (STRLEN(?targetMotifMatchCigarP9WQN5MF_0211244) - STRLEN(REPLACE(?targetMotifMatchCigarP9WQN5MF_0211244, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step154), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP9WQN5MF_0211244, 1, (STRLEN(?targetMotifMatchCigarP9WQN5MF_0211244) - STRLEN(REPLACE(?targetMotifMatchCigarP9WQN5MF_0211244, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step154), '}'), '')))), '[^-]', ''))) AS ?step255) . BIND(((?step255 + ?targetMotifMatchRegionMatchBeginPositionMF_0211245) - 1) AS ?thisPositionOn16) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP9WQN5MF_0211242, 1, (STRLEN(?templateMotifCigarP9WQN5MF_0211242) - STRLEN(REPLACE(?templateMotifCigarP9WQN5MF_0211242, CONCAT('^(?:-*[^-]){', STR(((301 - ?templateMotifSequenceMatchBeginPositionP9WQN543) + 1)), '}'), '')))), '[a-z]', '')) AS ?step156) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP9WQN5MF_0211244, 1, (STRLEN(?targetMotifMatchCigarP9WQN5MF_0211244) - STRLEN(REPLACE(?targetMotifMatchCigarP9WQN5MF_0211244, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step156), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP9WQN5MF_0211244, 1, (STRLEN(?targetMotifMatchCigarP9WQN5MF_0211244) - STRLEN(REPLACE(?targetMotifMatchCigarP9WQN5MF_0211244, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step156), '}'), '')))), '[^-]', ''))) AS ?step257) . BIND(((?step257 + ?targetMotifMatchRegionMatchBeginPositionMF_0211245) - 1) AS ?thisPositionOn17) . BIND(?this AS ?pfs2t58) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn16))) AS ?pfsb13) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn17))) AS ?pfse14) . FILTER (REGEX('G[ARNDCQEGHILKMFPSTWYVBZJUOX]GKT[LM]', SUBSTR(?thisSequenceValue, ?thisPositionOn16, (?thisPositionOn17 - ?thisPositionOn16)))) . BIND(URI(CONCAT(STR(?this), '#MF_02112a12')) AS ?annotation12) . BIND(?this AS ?pfs11) . } OPTIONAL { ?this a up:Protein . BIND(?this AS ?caseWithTag59) . } BIND(IF(BOUND(?tagCterminus), ?caseWithTag59, ?UNBOUND_VARIABLE) AS ?case1) . OPTIONAL { ?this a up:Protein . BIND(?this AS ?caseWithTag60) . } BIND(IF(BOUND(?tagCterminus), ?caseWithTag60, ?UNBOUND_VARIABLE) AS ?case2) . OPTIONAL { ?this a up:Protein . ?this up:organism ?thisOrganism . ?thisOrganism rdfs:subClassOf+ taxon:1762 . BIND(?this AS ?caseWithTag61) . } BIND(IF(BOUND(?tagCterminus), ?caseWithTag61, ?UNBOUND_VARIABLE) AS ?case3) . OPTIONAL { ?this a up:Protein . ?this up:organism ?thisOrganism . FILTER (! (EXISTS { ?thisOrganism rdfs:subClassOf+ taxon:1762 . })) . BIND(?this AS ?caseWithTag62) . } BIND(IF(BOUND(?tagCterminus), ?caseWithTag62, ?UNBOUND_VARIABLE) AS ?case4) . OPTIONAL { ?this up:annotation ?samcc63 ; up:sequence ?thisSequence . ?samcc63 up:range ?samccr64 ; rdf:type up:Coiled_Coil_Annotation . ?samccr64 faldo:begin ?samccb65 ; faldo:end ?samcce66 . ?samccb65 faldo:position ?samccbp67 ; faldo:reference ?thisSequence . ?samcce66 faldo:position ?samccep68 ; faldo:reference ?thisSequence . BIND(?this AS ?sam18) . } BIND(URI(CONCAT(STR(?this), '#MF_02112a24')) AS ?keyword24) . } "xsd:string
http://purl.uniprot.org/unirules/MF_02112http://www.w3.org/ns/shacl#rulehttp://purl.uniprot.org/unirules/MF_02112#construct
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