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http://purl.uniprot.org/unirules/MF_03012#constructhttps://hamap.expasy.org/rdf/vocab#addsTriplehttp://purl.uniprot.org/unirules/MF_03012#construct-template-38
http://purl.uniprot.org/unirules/MF_03012#constructhttps://hamap.expasy.org/rdf/vocab#addsTriplehttp://purl.uniprot.org/unirules/MF_03012#construct-template-33
http://purl.uniprot.org/unirules/MF_03012#constructhttps://hamap.expasy.org/rdf/vocab#addsTriplehttp://purl.uniprot.org/unirules/MF_03012#construct-template-18
http://purl.uniprot.org/unirules/MF_03012#constructhttps://hamap.expasy.org/rdf/vocab#addsTriplehttp://purl.uniprot.org/unirules/MF_03012#construct-template-78
http://purl.uniprot.org/unirules/MF_03012#constructhttps://hamap.expasy.org/rdf/vocab#addsTriplehttp://purl.uniprot.org/unirules/MF_03012#construct-template-14
http://purl.uniprot.org/unirules/MF_03012#constructhttps://hamap.expasy.org/rdf/vocab#addsTriplehttp://purl.uniprot.org/unirules/MF_03012#construct-template-16
http://purl.uniprot.org/unirules/MF_03012#constructhttps://hamap.expasy.org/rdf/vocab#addsTriplehttp://purl.uniprot.org/unirules/MF_03012#construct-template-75
http://purl.uniprot.org/unirules/MF_03012#constructhttps://hamap.expasy.org/rdf/vocab#addsTriplehttp://purl.uniprot.org/unirules/MF_03012#construct-template-5
http://purl.uniprot.org/unirules/MF_03012#constructhttps://hamap.expasy.org/rdf/vocab#addsTriplehttp://purl.uniprot.org/unirules/MF_03012#construct-template-79
http://purl.uniprot.org/unirules/MF_03012#constructhttps://hamap.expasy.org/rdf/vocab#addsTriplehttp://purl.uniprot.org/unirules/MF_03012#construct-template-77
http://purl.uniprot.org/unirules/MF_03012#constructhttps://hamap.expasy.org/rdf/vocab#addsTriplehttp://purl.uniprot.org/unirules/MF_03012#construct-template-73
http://purl.uniprot.org/unirules/MF_03012#constructhttps://hamap.expasy.org/rdf/vocab#addsTriplehttp://purl.uniprot.org/unirules/MF_03012#construct-template-70
http://purl.uniprot.org/unirules/MF_03012#constructhttps://hamap.expasy.org/rdf/vocab#addsTriplehttp://purl.uniprot.org/unirules/MF_03012#construct-template-72
http://purl.uniprot.org/unirules/MF_03012#constructhttp://www.w3.org/ns/shacl#prefixeshttp://purl.uniprot.org/unirules/
http://purl.uniprot.org/unirules/MF_03012#constructhttp://spinrdf.org/sp#wherehttp://purl.uniprot.org/unirules/MF_03012#construct-where-list-0
http://purl.uniprot.org/unirules/MF_03012#constructhttp://spinrdf.org/sp#templateshttp://purl.uniprot.org/unirules/MF_03012#construct-template-list-0
http://purl.uniprot.org/unirules/MF_03012#constructhttp://www.w3.org/ns/shacl#construct"CONSTRUCT { _:785287 up:source unirule:MF_03012 . _:785288 up:source unirule:MF_03012 . _:785289 up:source unirule:MF_03012 . _:785290 up:source unirule:MF_03012 . _:785291 up:source unirule:MF_03012 . _:785292 up:source unirule:MF_03012 . _:785293 up:source unirule:MF_03012 . _:785294 up:source unirule:MF_03012 . _:785295 up:source unirule:MF_03012 . _:785296 up:source unirule:MF_03012 . _:785297 up:source unirule:MF_03012 . _:785298 up:source unirule:MF_03012 . _:785299 up:source unirule:MF_03012 . _:785300 up:source unirule:MF_03012 . _:785301 up:source unirule:MF_03012 . _:785302 up:source unirule:MF_03012 . _:785303 up:source unirule:MF_03012 . _:785304 up:source unirule:MF_03012 . _:785305 up:source unirule:MF_03012 . _:785306 up:source unirule:MF_03012 . _:785307 up:source unirule:MF_03012 . _:785308 up:source unirule:MF_03012 . ?this up:annotation ?annotation0 ; up:classifiedWith GO:0001732 , GO:0002183 , GO:0003743 , GO:0005737 , GO:0016282 , GO:0033290 , GO:0071541 , keyword:396 , keyword:648 , keyword:963 . ?annotation0 a up:Similarity_Annotation ; rdfs:comment 'Belongs to the eIF-3 subunit M family.' . ?case1 up:classifiedWith keyword:7 . ?case4 up:classifiedWith GO:0005794 , keyword:333 . ?case5 up:classifiedWith GO:0000338 , GO:0008180 , keyword:217 , keyword:221 , keyword:736 , keyword:896 . ?pfs11 up:annotation ?annotation12 . ?annotation12 faldo:begin ?pfsb13 ; faldo:end ?pfse14 ; rdf:type up:Modified_Residue_Annotation ; rdfs:comment 'N-acetylserine' . ?pfsb13 faldo:position ?thisPositionOn15 ; rdf:type faldo:ExactPosition . ?pfse14 faldo:position ?thisPositionOn16 ; rdf:type faldo:ExactPosition . ?pfs17 up:annotation ?annotation18 . ?annotation18 faldo:begin ?pfsb19 ; faldo:end ?pfse20 ; rdf:type up:Initiator_Methionine_Annotation ; rdfs:comment 'Removed' . ?pfsb19 faldo:position ?thisPositionOn21 ; rdf:type faldo:ExactPosition . ?pfse20 faldo:position ?thisPositionOn22 ; rdf:type faldo:ExactPosition . _:785309 a rdf:Statement ; up:attribution _:785287 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation0 . _:785310 a rdf:Statement ; up:attribution _:785288 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:963 . _:785311 a rdf:Statement ; up:attribution _:785289 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:396 . _:785312 a rdf:Statement ; up:attribution _:785290 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:648 . _:785313 a rdf:Statement ; up:attribution _:785291 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0003743 . _:785314 a rdf:Statement ; up:attribution _:785292 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0001732 . _:785315 a rdf:Statement ; up:attribution _:785293 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0002183 . _:785316 a rdf:Statement ; up:attribution _:785294 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0005737 . _:785317 a rdf:Statement ; up:attribution _:785295 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0071541 . _:785318 a rdf:Statement ; up:attribution _:785296 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0016282 . _:785319 a rdf:Statement ; up:attribution _:785297 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0033290 . _:785320 a rdf:Statement ; up:attribution _:785298 ; rdf:subject ?case1 ; rdf:predicate up:classifiedWith ; rdf:object keyword:7 . _:785321 a rdf:Statement ; up:attribution _:785299 ; rdf:subject ?case4 ; rdf:predicate up:classifiedWith ; rdf:object keyword:333 . _:785322 a rdf:Statement ; up:attribution _:785300 ; rdf:subject ?case4 ; rdf:predicate up:classifiedWith ; rdf:object GO:0005794 . _:785323 a rdf:Statement ; up:attribution _:785301 ; rdf:subject ?case5 ; rdf:predicate up:classifiedWith ; rdf:object keyword:217 . _:785324 a rdf:Statement ; up:attribution _:785302 ; rdf:subject ?case5 ; rdf:predicate up:classifiedWith ; rdf:object keyword:221 . _:785325 a rdf:Statement ; up:attribution _:785303 ; rdf:subject ?case5 ; rdf:predicate up:classifiedWith ; rdf:object keyword:896 . _:785326 a rdf:Statement ; up:attribution _:785304 ; rdf:subject ?case5 ; rdf:predicate up:classifiedWith ; rdf:object keyword:736 . _:785327 a rdf:Statement ; up:attribution _:785305 ; rdf:subject ?case5 ; rdf:predicate up:classifiedWith ; rdf:object GO:0000338 . _:785328 a rdf:Statement ; up:attribution _:785306 ; rdf:subject ?case5 ; rdf:predicate up:classifiedWith ; rdf:object GO:0008180 . _:785329 a rdf:Statement ; up:source unirule:MF_03012 ; rdf:subject ?pfs11 ; rdf:predicate up:annotation ; rdf:object ?annotation12 . _:785330 a rdf:Statement ; up:attribution _:785307 ; rdf:subject ?pfs11 ; rdf:predicate up:annotation ; rdf:object ?annotation12 . _:785331 a rdf:Statement ; up:source unirule:MF_03012 ; rdf:subject ?pfs17 ; rdf:predicate up:annotation ; rdf:object ?annotation18 . _:785332 a rdf:Statement ; up:attribution _:785308 ; rdf:subject ?pfs17 ; rdf:predicate up:annotation ; rdf:object ?annotation18 . } WHERE { #baseURI: http://purl.uniprot.org/unirule/MF_03012 #Rule MF_03012 Created by:? on:2009-02-04 Modified by:Edouard de Castro on:2019-11-20 ?this up:organism ?thisOrganism ; rdfs:seeAlso signature:MF_03012 . ?thisOrganism rdfs:subClassOf+ taxon:2759 . BIND(URI(CONCAT(STR(?this), '#MF_03012a0')) AS ?annotation0) . OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch27 faldo:location ?templateMotifSequenceMatchRegionQ7L2H728 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ7L2H730 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ7L2H7MF_0301223 . ?templateMotifSequenceMatchRegionQ7L2H728 faldo:begin ?templateMotifSequenceMatchBeginQ7L2H729 . ?templateMotifSequenceMatchBeginQ7L2H729 faldo:position ?templateMotifSequenceMatchBeginPositionQ7L2H724 ; faldo:reference isoform:Q7L2H7-1 . ?templateMotifSequenceProfileAlignmentOperationQ7L2H730 edam:has_input signature:MF_03012 ; rdf:type edam:operation_0300 . ?targetMotifMatch31 faldo:location ?targetMotifMatchRegionMatch32 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_0301234 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ7L2H7MF_0301225 . ?targetMotifMatchRegionMatch32 faldo:begin ?targetMotifMatchRegionMatchBeginMF_0301233 . ?targetMotifMatchRegionMatchBeginMF_0301233 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0301226 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_0301234 edam:has_input signature:MF_03012 ; rdf:type edam:operation_0300 . BIND(?this AS ?tagacetyl) . ?this up:organism ?thisOrganism . ?thisOrganism rdfs:subClassOf+ taxon:40674 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ7L2H7MF_0301223, 1, (STRLEN(?templateMotifCigarQ7L2H7MF_0301223) - STRLEN(REPLACE(?templateMotifCigarQ7L2H7MF_0301223, CONCAT('^(?:-*[^-]){', STR(((2 - ?templateMotifSequenceMatchBeginPositionQ7L2H724) + 1)), '}'), '')))), '[a-z]', '')) AS ?step135) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ7L2H7MF_0301225, 1, (STRLEN(?targetMotifMatchCigarQ7L2H7MF_0301225) - STRLEN(REPLACE(?targetMotifMatchCigarQ7L2H7MF_0301225, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step135), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ7L2H7MF_0301225, 1, (STRLEN(?targetMotifMatchCigarQ7L2H7MF_0301225) - STRLEN(REPLACE(?targetMotifMatchCigarQ7L2H7MF_0301225, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step135), '}'), '')))), '[^-]', ''))) AS ?step236) . BIND(((?step236 + ?targetMotifMatchRegionMatchBeginPositionMF_0301226) - 1) AS ?thisPositionOn15) . BIND(?thisPositionOn15 AS ?thisPositionOn16) . BIND(?this AS ?pfs1t37) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn15))) AS ?pfsb13) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn16))) AS ?pfse14) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn15, 1) = 'S')) . BIND(URI(CONCAT(STR(?this), '#MF_03012a12')) AS ?annotation12) . BIND(?this AS ?pfs11) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch42 faldo:location ?templateMotifSequenceMatchRegionQ7L2H743 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ7L2H745 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ7L2H7MF_0301238 . ?templateMotifSequenceMatchRegionQ7L2H743 faldo:begin ?templateMotifSequenceMatchBeginQ7L2H744 . ?templateMotifSequenceMatchBeginQ7L2H744 faldo:position ?templateMotifSequenceMatchBeginPositionQ7L2H739 ; faldo:reference isoform:Q7L2H7-1 . ?templateMotifSequenceProfileAlignmentOperationQ7L2H745 edam:has_input signature:MF_03012 ; rdf:type edam:operation_0300 . ?targetMotifMatch46 faldo:location ?targetMotifMatchRegionMatch47 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_0301249 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ7L2H7MF_0301240 . ?targetMotifMatchRegionMatch47 faldo:begin ?targetMotifMatchRegionMatchBeginMF_0301248 . ?targetMotifMatchRegionMatchBeginMF_0301248 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0301241 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_0301249 edam:has_input signature:MF_03012 ; rdf:type edam:operation_0300 . ?this up:organism ?thisOrganism . ?thisOrganism rdfs:subClassOf+ taxon:40674 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ7L2H7MF_0301238, 1, (STRLEN(?templateMotifCigarQ7L2H7MF_0301238) - STRLEN(REPLACE(?templateMotifCigarQ7L2H7MF_0301238, CONCAT('^(?:-*[^-]){', STR(((1 - ?templateMotifSequenceMatchBeginPositionQ7L2H739) + 1)), '}'), '')))), '[a-z]', '')) AS ?step150) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ7L2H7MF_0301240, 1, (STRLEN(?targetMotifMatchCigarQ7L2H7MF_0301240) - STRLEN(REPLACE(?targetMotifMatchCigarQ7L2H7MF_0301240, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step150), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ7L2H7MF_0301240, 1, (STRLEN(?targetMotifMatchCigarQ7L2H7MF_0301240) - STRLEN(REPLACE(?targetMotifMatchCigarQ7L2H7MF_0301240, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step150), '}'), '')))), '[^-]', ''))) AS ?step251) . BIND(((?step251 + ?targetMotifMatchRegionMatchBeginPositionMF_0301241) - 1) AS ?thisPositionOn21) . BIND(?thisPositionOn21 AS ?thisPositionOn22) . BIND(?this AS ?pfs2t52) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn21))) AS ?pfsb19) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn22))) AS ?pfse20) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn21, 1) = 'M')) . BIND(URI(CONCAT(STR(?this), '#MF_03012a18')) AS ?annotation18) . BIND(?this AS ?pfs17) . } OPTIONAL { ?this a up:Protein . BIND(?this AS ?caseWithTag53) . } BIND(IF(BOUND(?tagacetyl), ?caseWithTag53, ?UNBOUND_VARIABLE) AS ?case1) . OPTIONAL { ?this a up:Protein . ?this up:organism ?thisOrganism . ?thisOrganism rdfs:subClassOf+ taxon:40674 . BIND(?this AS ?case2) . } OPTIONAL { ?this a up:Protein . ?this up:organism ?thisOrganism . ?thisOrganism rdfs:subClassOf+ taxon:7742 . BIND(?this AS ?case3) . } OPTIONAL { ?this a up:Protein . ?this up:organism ?thisOrganism . ?thisOrganism rdfs:subClassOf+ taxon:7214 . BIND(?this AS ?case4) . } OPTIONAL { ?this a up:Protein . ?this up:organism ?thisOrganism . ?thisOrganism rdfs:subClassOf+ taxon:6237 . BIND(?this AS ?case5) . } OPTIONAL { ?this a up:Protein . ?this up:organism ?thisOrganism . FILTER (! (EXISTS { ?thisOrganism rdfs:subClassOf+ taxon:7214 . })) . BIND(?this AS ?case6) . } OPTIONAL { ?this a up:Protein . ?this up:organism ?thisOrganism . ?thisOrganism rdfs:subClassOf+ taxon:7742 . FILTER (! (EXISTS { ?thisOrganism rdfs:subClassOf+ taxon:40674 . })) . BIND(?this AS ?case7) . } OPTIONAL { ?this a up:Protein . ?this up:organism ?thisOrganism . FILTER (! (EXISTS { VALUES ?supertaxon54 {taxon:6237 taxon:40674} ?thisOrganism rdfs:subClassOf+ ?supertaxon54 . })) . BIND(?this AS ?case8) . } OPTIONAL { ?this a up:Protein . ?this up:organism ?thisOrganism . FILTER (! (EXISTS { VALUES ?supertaxon55 {taxon:7214 taxon:6237} ?thisOrganism rdfs:subClassOf+ ?supertaxon55 . })) . BIND(?this AS ?case9) . } OPTIONAL { ?this a up:Protein . ?this up:organism ?thisOrganism . FILTER (! (EXISTS { VALUES ?supertaxon56 {taxon:6237 taxon:7214 taxon:7742} ?thisOrganism rdfs:subClassOf+ ?supertaxon56 . })) . BIND(?this AS ?case10) . } } "xsd:string
http://purl.uniprot.org/unirules/MF_03012http://www.w3.org/ns/shacl#rulehttp://purl.uniprot.org/unirules/MF_03012#construct
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