| http://purl.uniprot.org/unirules/MF_03024#construct | http://www.w3.org/ns/shacl#construct | "CONSTRUCT {
_:792662 up:source unirule:MF_03024 .
_:792663 up:source unirule:MF_03024 .
_:792664 up:source unirule:MF_03024 .
_:792665 up:source unirule:MF_03024 .
_:792666 up:source unirule:MF_03024 .
_:792667 up:source unirule:MF_03024 .
_:792668 up:source unirule:MF_03024 .
_:792669 up:source unirule:MF_03024 .
_:792670 up:source unirule:MF_03024 .
_:792671 up:source unirule:MF_03024 .
_:792672 up:source unirule:MF_03024 .
_:792673 up:source unirule:MF_03024 .
_:792674 up:source unirule:MF_03024 .
_:792675 up:source unirule:MF_03024 .
_:792676 up:source unirule:MF_03024 .
_:792677 up:source unirule:MF_03024 .
_:792678 up:source unirule:MF_03024 .
_:792679 up:source unirule:MF_03024 .
?this up:alternativeName ?name1 ;
up:annotation ?annotation3 ,
?annotation4 ,
?annotation6 ,
?annotation11 ;
up:classifiedWith GO:0005737 ,
GO:0007283 ,
GO:0008017 ,
GO:0051013 ,
keyword:206 ,
keyword:413 ,
keyword:493 ,
keyword:547 ,
keyword:67 ,
keyword:963 ;
up:recommendedName ?name0 .
?name0 up:ecName '5.6.1.1' ;
up:fullName 'Katanin p60 ATPase-containing subunit A-like 1' ;
up:shortName 'Katanin p60 subunit A-like 1' ;
rdf:type up:Structured_Name .
?name1 up:fullName 'p60 katanin-like 1' ;
rdf:type up:Structured_Name .
?gene2 skos:prefLabel 'KATNAL1' .
?annotation3 a up:Function_Annotation ;
rdfs:comment 'Regulates microtubule dynamics in Sertoli cells, a process that is essential for spermiogenesis and male fertility. Severs microtubules in an ATP-dependent manner, promoting rapid reorganization of cellular microtubule arrays.' .
?annotation4 up:activity ?activity5 ;
rdf:type up:Catalytic_Activity_Annotation .
?activity5 up:enzymeClass .
?annotation6 a up:Subcellular_Location_Annotation ;
rdfs:comment 'Colocalizes with microtubules throughout the basal and adluminal compartments of Sertoli cells. Localizes within the cytoplasm, partially overlapping with microtubules, in interphase and to the mitotic spindle and spindle poles during mitosis' .
?annotation6li7 up:cellularComponent .
?annotation6li8 up:cellularComponent .
?annotation6li9 up:cellularComponent .
?annotation6li10 up:cellularComponent .
?annotation11 a up:Similarity_Annotation ;
rdfs:comment 'Belongs to the AAA ATPase family. Katanin p60 subunit A1 subfamily. A-like 1 sub-subfamily.' .
?pfs13 up:annotation ?annotation14 .
?annotation14 faldo:begin ?pfsb15 ;
faldo:end ?pfse16 ;
up:ligand ?ligand17 ;
rdf:type up:Binding_Site_Annotation .
?pfsb15 faldo:position ?thisPositionOn18 ;
rdf:type faldo:ExactPosition .
?pfse16 faldo:position ?thisPositionOn19 ;
rdf:type faldo:ExactPosition .
?ligand17 rdfs:subClassOf chebi:30616 .
_:792680 a rdf:Statement ;
up:attribution _:792662 ;
rdf:subject ?this ;
rdf:predicate up:recommendedName ;
rdf:object ?name0 .
_:792681 a rdf:Statement ;
up:attribution _:792663 ;
rdf:subject ?this ;
rdf:predicate up:alternativeName ;
rdf:object ?name1 .
_:792682 a rdf:Statement ;
up:attribution _:792664 ;
rdf:subject ?gene2 ;
rdf:predicate up:encodedBy ;
rdf:object ?gene2 .
_:792683 a rdf:Statement ;
up:attribution _:792665 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation3 .
_:792684 a rdf:Statement ;
up:attribution _:792666 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation4 .
_:792685 a rdf:Statement ;
up:attribution _:792667 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation6 .
_:792686 a rdf:Statement ;
up:attribution _:792668 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation11 .
_:792687 a rdf:Statement ;
up:attribution _:792669 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:67 .
_:792688 a rdf:Statement ;
up:attribution _:792670 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:963 .
_:792689 a rdf:Statement ;
up:attribution _:792671 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:206 .
_:792690 a rdf:Statement ;
up:attribution _:792672 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:413 .
_:792691 a rdf:Statement ;
up:attribution _:792673 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:493 .
_:792692 a rdf:Statement ;
up:attribution _:792674 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:547 .
_:792693 a rdf:Statement ;
up:attribution _:792675 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0008017 .
_:792694 a rdf:Statement ;
up:attribution _:792676 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0051013 .
_:792695 a rdf:Statement ;
up:attribution _:792677 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0005737 .
_:792696 a rdf:Statement ;
up:attribution _:792678 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0007283 .
_:792697 a rdf:Statement ;
up:source unirule:MF_03024 ;
rdf:subject ?pfs13 ;
rdf:predicate up:annotation ;
rdf:object ?annotation14 .
_:792698 a rdf:Statement ;
up:attribution _:792679 ;
rdf:subject ?pfs13 ;
rdf:predicate up:annotation ;
rdf:object ?annotation14 .
}
WHERE {
#baseURI: http://purl.uniprot.org/unirule/MF_03024
#Rule MF_03024 Created by:? on:2009-02-20 Modified by:Edouard de Castro on:2022-11-19
?this up:organism ?thisOrganism ;
rdfs:seeAlso signature:MF_03024 .
?thisOrganism rdfs:subClassOf+ taxon:7742 .
BIND(URI(CONCAT(STR(?this), '#MF_03024a0')) AS ?name0) .
BIND(URI(CONCAT(STR(?this), '#MF_03024a1')) AS ?name1) .
BIND(URI(CONCAT(STR(?this), '#MF_03024a3')) AS ?annotation3) .
BIND(URI(CONCAT(STR(?this), '#MF_03024a4')) AS ?annotation4) .
BIND(URI(CONCAT(STR(?this), '#MF_03024a6')) AS ?annotation6) .
BIND(URI(CONCAT(STR(?this), '#MF_03024a11')) AS ?annotation11) .
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch24 faldo:location ?templateMotifSequenceMatchRegionQ9BW6225 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ9BW6227 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarQ9BW62MF_0302420 .
?templateMotifSequenceMatchRegionQ9BW6225 faldo:begin ?templateMotifSequenceMatchBeginQ9BW6226 .
?templateMotifSequenceMatchBeginQ9BW6226 faldo:position ?templateMotifSequenceMatchBeginPositionQ9BW6221 ;
faldo:reference isoform:Q9BW62-1 .
?templateMotifSequenceProfileAlignmentOperationQ9BW6227 edam:has_input signature:MF_03024 ;
rdf:type edam:operation_0300 .
?targetMotifMatch28 faldo:location ?targetMotifMatchRegionMatch29 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_0302431 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarQ9BW62MF_0302422 .
?targetMotifMatchRegionMatch29 faldo:begin ?targetMotifMatchRegionMatchBeginMF_0302430 .
?targetMotifMatchRegionMatchBeginMF_0302430 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0302423 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_0302431 edam:has_input signature:MF_03024 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ9BW62MF_0302420, 1, (STRLEN(?templateMotifCigarQ9BW62MF_0302420) - STRLEN(REPLACE(?templateMotifCigarQ9BW62MF_0302420, CONCAT('^(?:-*[^-]){', STR(((248 - ?templateMotifSequenceMatchBeginPositionQ9BW6221) + 1)), '}'), '')))), '[a-z]', '')) AS ?step132) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ9BW62MF_0302422, 1, (STRLEN(?targetMotifMatchCigarQ9BW62MF_0302422) - STRLEN(REPLACE(?targetMotifMatchCigarQ9BW62MF_0302422, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step132), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ9BW62MF_0302422, 1, (STRLEN(?targetMotifMatchCigarQ9BW62MF_0302422) - STRLEN(REPLACE(?targetMotifMatchCigarQ9BW62MF_0302422, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step132), '}'), '')))), '[^-]', ''))) AS ?step233) .
BIND(((?step233 + ?targetMotifMatchRegionMatchBeginPositionMF_0302423) - 1) AS ?thisPositionOn18) .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ9BW62MF_0302420, 1, (STRLEN(?templateMotifCigarQ9BW62MF_0302420) - STRLEN(REPLACE(?templateMotifCigarQ9BW62MF_0302420, CONCAT('^(?:-*[^-]){', STR(((255 - ?templateMotifSequenceMatchBeginPositionQ9BW6221) + 1)), '}'), '')))), '[a-z]', '')) AS ?step134) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ9BW62MF_0302422, 1, (STRLEN(?targetMotifMatchCigarQ9BW62MF_0302422) - STRLEN(REPLACE(?targetMotifMatchCigarQ9BW62MF_0302422, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step134), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ9BW62MF_0302422, 1, (STRLEN(?targetMotifMatchCigarQ9BW62MF_0302422) - STRLEN(REPLACE(?targetMotifMatchCigarQ9BW62MF_0302422, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step134), '}'), '')))), '[^-]', ''))) AS ?step235) .
BIND(((?step235 + ?targetMotifMatchRegionMatchBeginPositionMF_0302423) - 1) AS ?thisPositionOn19) .
BIND(?this AS ?pfs1t36) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn18))) AS ?pfsb15) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn19))) AS ?pfse16) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn18, (?thisPositionOn19 - ?thisPositionOn18)) = 'GPPGTGKT')) .
BIND(URI(CONCAT(STR(?this), '#MF_03024a14')) AS ?annotation14) .
BIND(?this AS ?pfs13) .
}
OPTIONAL {
?this a up:Protein .
?this up:organism ?thisOrganism .
?thisOrganism rdfs:subClassOf+ taxon:40674 .
BIND(?this AS ?case12) .
}
}
"xsd:string |
