| http://purl.uniprot.org/unirules/MF_03025#construct | http://www.w3.org/ns/shacl#construct | "CONSTRUCT {
_:792979 up:source unirule:MF_03025 .
_:792980 up:source unirule:MF_03025 .
_:792981 up:source unirule:MF_03025 .
_:792982 up:source unirule:MF_03025 .
_:792983 up:source unirule:MF_03025 .
_:792984 up:source unirule:MF_03025 .
_:792985 up:source unirule:MF_03025 .
_:792986 up:source unirule:MF_03025 .
_:792987 up:source unirule:MF_03025 .
_:792988 up:source unirule:MF_03025 .
_:792989 up:source unirule:MF_03025 .
_:792990 up:source unirule:MF_03025 .
_:792991 up:source unirule:MF_03025 .
_:792992 up:source unirule:MF_03025 .
_:792993 up:source unirule:MF_03025 .
_:792994 up:source unirule:MF_03025 .
_:792995 up:source unirule:MF_03025 .
?this up:alternativeName ?name1 ;
up:annotation ?annotation3 ,
?annotation4 ,
?annotation6 ,
?annotation11 ;
up:classifiedWith GO:0005737 ,
GO:0008017 ,
GO:0051013 ,
keyword:206 ,
keyword:413 ,
keyword:493 ,
keyword:547 ,
keyword:67 ,
keyword:963 ;
up:recommendedName ?name0 .
?name0 up:ecName '5.6.1.1' ;
up:fullName 'Katanin p60 ATPase-containing subunit A-like 2' ;
up:shortName 'Katanin p60 subunit A-like 2' ;
rdf:type up:Structured_Name .
?name1 up:fullName 'p60 katanin-like 2' ;
rdf:type up:Structured_Name .
?gene2 skos:prefLabel 'KATNAL2' .
?annotation3 a up:Function_Annotation ;
rdfs:comment 'Severs microtubules in vitro in an ATP-dependent manner. This activity may promote rapid reorganization of cellular microtubule arrays.' .
?annotation4 up:activity ?activity5 ;
rdf:type up:Catalytic_Activity_Annotation .
?activity5 up:enzymeClass .
?annotation6 a up:Subcellular_Location_Annotation ;
rdfs:comment 'Localizes within the cytoplasm, partially overlapping with microtubules in interphase and to the mitotic spindle and spindle poles during mitosis' .
?annotation6li7 up:cellularComponent .
?annotation6li8 up:cellularComponent .
?annotation6li9 up:cellularComponent .
?annotation6li10 up:cellularComponent .
?annotation11 a up:Similarity_Annotation ;
rdfs:comment 'Belongs to the AAA ATPase family. Katanin p60 subunit A1 subfamily. A-like 2 sub-subfamily.' .
?pfs12 up:annotation ?annotation13 .
?annotation13 faldo:begin ?pfsb14 ;
faldo:end ?pfse15 ;
up:ligand ?ligand16 ;
rdf:type up:Binding_Site_Annotation .
?pfsb14 faldo:position ?thisPositionOn17 ;
rdf:type faldo:ExactPosition .
?pfse15 faldo:position ?thisPositionOn18 ;
rdf:type faldo:ExactPosition .
?ligand16 rdfs:subClassOf chebi:30616 .
_:792996 a rdf:Statement ;
up:attribution _:792979 ;
rdf:subject ?this ;
rdf:predicate up:recommendedName ;
rdf:object ?name0 .
_:792997 a rdf:Statement ;
up:attribution _:792980 ;
rdf:subject ?this ;
rdf:predicate up:alternativeName ;
rdf:object ?name1 .
_:792998 a rdf:Statement ;
up:attribution _:792981 ;
rdf:subject ?gene2 ;
rdf:predicate up:encodedBy ;
rdf:object ?gene2 .
_:792999 a rdf:Statement ;
up:attribution _:792982 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation3 .
_:793000 a rdf:Statement ;
up:attribution _:792983 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation4 .
_:793001 a rdf:Statement ;
up:attribution _:792984 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation6 .
_:793002 a rdf:Statement ;
up:attribution _:792985 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation11 .
_:793003 a rdf:Statement ;
up:attribution _:792986 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:67 .
_:793004 a rdf:Statement ;
up:attribution _:792987 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:963 .
_:793005 a rdf:Statement ;
up:attribution _:792988 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:206 .
_:793006 a rdf:Statement ;
up:attribution _:792989 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:413 .
_:793007 a rdf:Statement ;
up:attribution _:792990 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:493 .
_:793008 a rdf:Statement ;
up:attribution _:792991 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:547 .
_:793009 a rdf:Statement ;
up:attribution _:792992 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0008017 .
_:793010 a rdf:Statement ;
up:attribution _:792993 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0051013 .
_:793011 a rdf:Statement ;
up:attribution _:792994 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0005737 .
_:793012 a rdf:Statement ;
up:source unirule:MF_03025 ;
rdf:subject ?pfs12 ;
rdf:predicate up:annotation ;
rdf:object ?annotation13 .
_:793013 a rdf:Statement ;
up:attribution _:792995 ;
rdf:subject ?pfs12 ;
rdf:predicate up:annotation ;
rdf:object ?annotation13 .
}
WHERE {
#baseURI: http://purl.uniprot.org/unirule/MF_03025
#Rule MF_03025 Created by:? on:2012-10-09 Modified by:Edouard de Castro on:2022-11-19
?this up:organism ?thisOrganism ;
rdfs:seeAlso signature:MF_03025 .
?thisOrganism rdfs:subClassOf+ taxon:2759 .
BIND(URI(CONCAT(STR(?this), '#MF_03025a0')) AS ?name0) .
BIND(URI(CONCAT(STR(?this), '#MF_03025a1')) AS ?name1) .
BIND(URI(CONCAT(STR(?this), '#MF_03025a3')) AS ?annotation3) .
BIND(URI(CONCAT(STR(?this), '#MF_03025a4')) AS ?annotation4) .
BIND(URI(CONCAT(STR(?this), '#MF_03025a6')) AS ?annotation6) .
BIND(URI(CONCAT(STR(?this), '#MF_03025a11')) AS ?annotation11) .
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch23 faldo:location ?templateMotifSequenceMatchRegionQ8IYT424 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ8IYT426 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarQ8IYT4MF_0302519 .
?templateMotifSequenceMatchRegionQ8IYT424 faldo:begin ?templateMotifSequenceMatchBeginQ8IYT425 .
?templateMotifSequenceMatchBeginQ8IYT425 faldo:position ?templateMotifSequenceMatchBeginPositionQ8IYT420 ;
faldo:reference isoform:Q8IYT4-1 .
?templateMotifSequenceProfileAlignmentOperationQ8IYT426 edam:has_input signature:MF_03025 ;
rdf:type edam:operation_0300 .
?targetMotifMatch27 faldo:location ?targetMotifMatchRegionMatch28 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_0302530 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarQ8IYT4MF_0302521 .
?targetMotifMatchRegionMatch28 faldo:begin ?targetMotifMatchRegionMatchBeginMF_0302529 .
?targetMotifMatchRegionMatchBeginMF_0302529 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0302522 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_0302530 edam:has_input signature:MF_03025 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ8IYT4MF_0302519, 1, (STRLEN(?templateMotifCigarQ8IYT4MF_0302519) - STRLEN(REPLACE(?templateMotifCigarQ8IYT4MF_0302519, CONCAT('^(?:-*[^-]){', STR(((294 - ?templateMotifSequenceMatchBeginPositionQ8IYT420) + 1)), '}'), '')))), '[a-z]', '')) AS ?step131) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ8IYT4MF_0302521, 1, (STRLEN(?targetMotifMatchCigarQ8IYT4MF_0302521) - STRLEN(REPLACE(?targetMotifMatchCigarQ8IYT4MF_0302521, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step131), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ8IYT4MF_0302521, 1, (STRLEN(?targetMotifMatchCigarQ8IYT4MF_0302521) - STRLEN(REPLACE(?targetMotifMatchCigarQ8IYT4MF_0302521, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step131), '}'), '')))), '[^-]', ''))) AS ?step232) .
BIND(((?step232 + ?targetMotifMatchRegionMatchBeginPositionMF_0302522) - 1) AS ?thisPositionOn17) .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ8IYT4MF_0302519, 1, (STRLEN(?templateMotifCigarQ8IYT4MF_0302519) - STRLEN(REPLACE(?templateMotifCigarQ8IYT4MF_0302519, CONCAT('^(?:-*[^-]){', STR(((301 - ?templateMotifSequenceMatchBeginPositionQ8IYT420) + 1)), '}'), '')))), '[a-z]', '')) AS ?step133) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ8IYT4MF_0302521, 1, (STRLEN(?targetMotifMatchCigarQ8IYT4MF_0302521) - STRLEN(REPLACE(?targetMotifMatchCigarQ8IYT4MF_0302521, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step133), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ8IYT4MF_0302521, 1, (STRLEN(?targetMotifMatchCigarQ8IYT4MF_0302521) - STRLEN(REPLACE(?targetMotifMatchCigarQ8IYT4MF_0302521, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step133), '}'), '')))), '[^-]', ''))) AS ?step234) .
BIND(((?step234 + ?targetMotifMatchRegionMatchBeginPositionMF_0302522) - 1) AS ?thisPositionOn18) .
BIND(?this AS ?pfs1t35) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn17))) AS ?pfsb14) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn18))) AS ?pfse15) .
FILTER (REGEX('GPP[GD][TLN]GKT', SUBSTR(?thisSequenceValue, ?thisPositionOn17, (?thisPositionOn18 - ?thisPositionOn17)))) .
BIND(URI(CONCAT(STR(?this), '#MF_03025a13')) AS ?annotation13) .
BIND(?this AS ?pfs12) .
}
}
"xsd:string |
