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http://purl.uniprot.org/unirules/MF_04138#constructhttp://spinrdf.org/sp#wherehttp://purl.uniprot.org/unirules/MF_04138#construct-where-list-0
http://purl.uniprot.org/unirules/MF_04138#constructhttp://spinrdf.org/sp#templateshttp://purl.uniprot.org/unirules/MF_04138#construct-template-list-0
http://purl.uniprot.org/unirules/MF_04138#constructhttp://www.w3.org/ns/shacl#construct"CONSTRUCT { _:967584 up:source unirule:MF_04138 . _:967585 up:source unirule:MF_04138 . _:967586 up:source unirule:MF_04138 . _:967587 up:source unirule:MF_04138 . _:967588 up:source unirule:MF_04138 . _:967589 up:source unirule:MF_04138 . _:967590 up:source unirule:MF_04138 . _:967591 up:source unirule:MF_04138 . _:967592 up:source unirule:MF_04138 . _:967593 up:source unirule:MF_04138 . _:967594 up:fullName 'Entry protein H*' ; rdf:type up:Structured_Name . _:967595 up:source unirule:MF_04138 . _:967596 up:source unirule:MF_04138 . _:967597 up:source unirule:MF_04138 . _:967598 up:source unirule:MF_04138 . _:967599 up:source unirule:MF_04138 . ?this up:annotation ?annotation0 ; up:classifiedWith GO:0098003 , GO:0098015 , keyword:1160 , keyword:1162 , keyword:1171 , keyword:1188 , keyword:1227 , keyword:1245 , keyword:946 ; up:component ?namedpart1 . ?annotation0 a up:Similarity_Annotation ; rdfs:comment 'Belongs to the Lambdavirus tape measure protein family.' . ?namedpart1 up:recommendedName _:967594 . ?case2 up:classifiedWith keyword:1243 . ?pfs4 up:annotation ?annotation5 . ?annotation5 faldo:begin ?pfsb6 ; faldo:end ?pfse7 ; rdf:type up:Chain_Annotation ; rdfs:comment 'Tape measure protein' . ?pfsb6 faldo:position ?thisPositionOn8 ; rdf:type faldo:ExactPosition . ?pfse7 faldo:position ?thisPositionOn9 ; rdf:type faldo:ExactPosition . ?pfs10 up:annotation ?annotation11 . ?annotation11 faldo:begin ?pfsb12 ; faldo:end ?pfse13 ; rdf:type up:Chain_Annotation ; rdfs:comment 'Entry protein H*' . ?pfsb12 a faldo:InRangePosition . ?pfse13 faldo:position ?thisPositionOn14 ; rdf:type faldo:ExactPosition . ?sam15 up:classifiedWith keyword:175 . ?coiledCoil16 faldo:begin ?coiledCoilb17 ; faldo:end ?coiledCoile18 . ?coiledCoilb17 faldo:position ?coiledCoilbp19 . ?coiledCoile18 faldo:position ?coiledCoilep20 . ?keyword21 up:range ?coiledCoil16 . _:967600 a rdf:Statement ; up:attribution _:967584 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation0 . _:967601 a rdf:Statement ; up:attribution _:967585 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:1171 . _:967602 a rdf:Statement ; up:attribution _:967586 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:1162 . _:967603 a rdf:Statement ; up:attribution _:967587 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:1188 . _:967604 a rdf:Statement ; up:attribution _:967588 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:1245 . _:967605 a rdf:Statement ; up:attribution _:967589 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:1227 . _:967606 a rdf:Statement ; up:attribution _:967590 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:946 . _:967607 a rdf:Statement ; up:attribution _:967591 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:1160 . _:967608 a rdf:Statement ; up:attribution _:967592 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0098003 . _:967609 a rdf:Statement ; up:attribution _:967593 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0098015 . _:967610 a rdf:Statement ; up:attribution _:967595 ; rdf:subject ?this ; rdf:predicate up:component ; rdf:object ?namedpart1 . _:967611 a rdf:Statement ; up:attribution _:967596 ; rdf:subject ?case2 ; rdf:predicate up:classifiedWith ; rdf:object keyword:1243 . _:967612 a rdf:Statement ; up:source unirule:MF_04138 ; rdf:subject ?pfs4 ; rdf:predicate up:annotation ; rdf:object ?annotation5 . _:967613 a rdf:Statement ; up:attribution _:967597 ; rdf:subject ?pfs4 ; rdf:predicate up:annotation ; rdf:object ?annotation5 . _:967614 a rdf:Statement ; up:source unirule:MF_04138 ; rdf:subject ?pfs10 ; rdf:predicate up:annotation ; rdf:object ?annotation11 . _:967615 a rdf:Statement ; up:attribution _:967598 ; rdf:subject ?pfs10 ; rdf:predicate up:annotation ; rdf:object ?annotation11 . _:967616 a rdf:Statement ; up:attribution _:967599 ; rdf:subject ?sam15 ; rdf:predicate up:classifiedWith ; rdf:object keyword:175 . } WHERE { #baseURI: http://purl.uniprot.org/unirule/MF_04138 #Rule MF_04138 Created by:? on:2019-05-17 Modified by:Edouard de Castro on:2023-06-01 ?this up:organism ?thisOrganism ; rdfs:seeAlso signature:MF_04138 . ?thisOrganism rdfs:subClassOf+ taxon:10239 . BIND(URI(CONCAT(STR(?this), '#MF_04138a0')) AS ?annotation0) . BIND(URI(CONCAT(STR(?this), '#MF_04138a1')) AS ?namedpart1) . OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch26 faldo:location ?templateMotifSequenceMatchRegionP0373627 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0373629 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP03736MF_0413822 . ?templateMotifSequenceMatchRegionP0373627 faldo:begin ?templateMotifSequenceMatchBeginP0373628 . ?templateMotifSequenceMatchBeginP0373628 faldo:position ?templateMotifSequenceMatchBeginPositionP0373623 ; faldo:reference isoform:P03736-1 . ?templateMotifSequenceProfileAlignmentOperationP0373629 edam:has_input signature:MF_04138 ; rdf:type edam:operation_0300 . ?targetMotifMatch30 faldo:location ?targetMotifMatchRegionMatch31 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_0413833 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP03736MF_0413824 . ?targetMotifMatchRegionMatch31 faldo:begin ?targetMotifMatchRegionMatchBeginMF_0413832 . ?targetMotifMatchRegionMatchBeginMF_0413832 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0413825 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_0413833 edam:has_input signature:MF_04138 ; rdf:type edam:operation_0300 . BIND(1 AS ?thisPositionOn8) . BIND(STRLEN(?thisSequenceValue) AS ?thisPositionOn9) . BIND(?this AS ?pfs1t34) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn8))) AS ?pfsb6) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn9))) AS ?pfse7) . FILTER ((BOUND(?thisPositionOn8) && BOUND(?thisPositionOn9))) . BIND(URI(CONCAT(STR(?this), '#MF_04138a5')) AS ?annotation5) . BIND(?this AS ?pfs4) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch39 faldo:location ?templateMotifSequenceMatchRegionP0373640 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0373642 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP03736MF_0413835 . ?templateMotifSequenceMatchRegionP0373640 faldo:begin ?templateMotifSequenceMatchBeginP0373641 . ?templateMotifSequenceMatchBeginP0373641 faldo:position ?templateMotifSequenceMatchBeginPositionP0373636 ; faldo:reference isoform:P03736-1 . ?templateMotifSequenceProfileAlignmentOperationP0373642 edam:has_input signature:MF_04138 ; rdf:type edam:operation_0300 . ?targetMotifMatch43 faldo:location ?targetMotifMatchRegionMatch44 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_0413846 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP03736MF_0413837 . ?targetMotifMatchRegionMatch44 faldo:begin ?targetMotifMatchRegionMatchBeginMF_0413845 . ?targetMotifMatchRegionMatchBeginMF_0413845 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0413838 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_0413846 edam:has_input signature:MF_04138 ; rdf:type edam:operation_0300 . ?this up:organism ?thisOrganism . ?thisOrganism rdfs:subClassOf+ taxon:186765 . #The SPARQL translation code does not yet deal with positions that are uknown BIND(URI(CONCAT(STR(?this), '#MF_04138a11')) AS ?annotation11) . BIND(?this AS ?pfs10) . } OPTIONAL { ?this a up:Protein . ?this up:organism ?thisOrganism . ?thisOrganism rdfs:subClassOf+ taxon:186765 . BIND(?this AS ?case2) . } OPTIONAL { ?this a up:Protein . ?this up:organism ?thisOrganism . FILTER (! (EXISTS { ?thisOrganism rdfs:subClassOf+ taxon:186765 . })) . BIND(?this AS ?case3) . } OPTIONAL { ?this up:annotation ?samcc47 ; up:sequence ?thisSequence . ?samcc47 up:range ?samccr48 ; rdf:type up:Coiled_Coil_Annotation . ?samccr48 faldo:begin ?samccb49 ; faldo:end ?samcce50 . ?samccb49 faldo:position ?samccbp51 ; faldo:reference ?thisSequence . ?samcce50 faldo:position ?samccep52 ; faldo:reference ?thisSequence . BIND(?this AS ?sam15) . } BIND(URI(CONCAT(STR(?this), '#MF_04138a21')) AS ?keyword21) . } "xsd:string
http://purl.uniprot.org/unirules/MF_04138http://www.w3.org/ns/shacl#rulehttp://purl.uniprot.org/unirules/MF_04138#construct
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