HAMAP: Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / NCTC 10582 / E50 / VPI-5482) complete proteome
General information

Species:  Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / NCTC 10582 / E50 / VPI-5482)
Species code: BACTN
Taxonomy: Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides (TaxID: 226186) [NEWT/ NCBI]
Description: The human distal gut microbiota contain more bacterial cells than all of our body's other microbial communities combined. More than 90% of phylogenetic types belong to two divisions, the Bacteroidetes and the Firmicutes, with the remaining types distributed among eight other divisions.

Bacteroides thetaiotaomicron is a Gram-negative anaerobe bacterium. It is a dominant member of human distal intestinal microbiota.
Properties: Presence of flagella: No
Human pathogen: No
Interaction: Animal commensal in Mammalia
Number of membranes: 2
Number of inteins:0
Statistics: Number of BACTN entries in the UniProt Knowledgebase: 355 (355 in UniProtKB/Swiss-Prot + 0 in UniProtKB/TrEMBL)


Genome(s) sequenced

Strain:    ATCC 29148 / DSM 2079 / NCTC 10582 / E50 / VPI-5482
Genome structure:
• Chromosome EMBL accession number AE015928 (circular; 6,260,361 bp) (download entry)
• Plasmid p5482 EMBL accession number AY171301 (circular; 33,038 bp) (download entry)
Reference(s):
[1] MEDLINE=22550858; PubMed=12663928; [ NCBI , EBI , Israel , Japan ]
Xu J., Bjursell M.K., Himrod J., Deng S., Carmichael L.K., Chiang H.C., Hooper L.V., Gordon J.I. ;
"A genomic view of the human-Bacteroides thetaiotaomicron symbiosis.";
Science 299:2074-2076(2003).
Web links:
CBS: http://www.cbs.dtu.dk/services/GenomeAtlas/show-genus.php?kingdom=Bacteria&GLgenus=Bacteroides&GLspecies=thetaiotaomicron&GLstrain=VPI5482
Entrez Genome Project: http://www.ncbi.nlm.nih.gov/sites/entrez?Db=genomeprj&Cmd=DetailsSearch&Term=txid226186%5Borgn%5D
GIB (DDBJ): http://gib.genes.nig.ac.jp/single/index.php?spid=Bthe_VPI5482
JVCI CMR: http://cmr.jcvi.org/tigr-scripts/CMR/GenomePage.cgi?database=ntbt01
Karyn's Genomes: http://www.ebi.ac.uk/2can/genomes/bacteria/Bacteroides_thetaiotaomicron.html
PEDANT: http://pedant.gsf.de/pedant3htmlview/pedant3view?Method=analysis&Db=p3_p399_Bac_theta
 EBI Proteome Analysis page



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