HAMAP: Burkholderia cenocepacia (strain MC0-3) complete proteome
General information

Species:  Burkholderia cenocepacia (strain MC0-3)
Species code: BURCC
Taxonomy: Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex (TaxID: 406425) [NEWT/ NCBI]
Description: The Burkholderia cepacia complex (Bcc) comprises at least nine closely related species which can be correctly identified only by polyphasic taxonomic approaches. Members of the complex are among the most metabolically versatile microorganisms known as they grow on more than 200 organic compounds, fix N2 and carry multiple antibiotic resistances. They are involved in important processes such as biodegradation of pollutants, biocontrol of root diseases but some also cause disease in plants, animals and humans. Bcc strains are isolated from very different habitats, including soil, rhizospheres, streams and infected plants, animals and human tissues, especially lungs of cystic fibrosis (CF) patients. Bcc strains have large and plastic genomes comprised of multiple (2 to 4) replicons, which is thought to give them their ecological versatility.

Burkholderia cenocepacia is a Gram-negative bacterium which is ubiquitous in the environment and may cause a number of diseases in plants. B.cenocepacia strain MC0-3 was recovered from the maize rhizosphere at a density of 100 to 1,000 cells per g in Michigan, USA in August 2004. It was shown to display water-soaking activity in onion pathogenicity tests, but neither maceration nor chlorosis symptoms and no nitrogen fixation capabilities were evidenced (modified from http://genome.jgi-psf.org/finished_microbes/burc3/burc3.home.html).
Properties: Presence of flagella: Yes
Human pathogen: No
Interaction: No
Number of membranes: 2
Number of inteins:0
Statistics: Number of BURCC entries in the UniProt Knowledgebase: 6986 (359 in UniProtKB/Swiss-Prot + 6627 in UniProtKB/TrEMBL)


Genome(s) sequenced

Strain:    MC0-3
Genome structure:
• Chromosome 1 EMBL accession number CP000958 (circular; 3,532,883 bp) (download entry)
• Chromosome 2 EMBL accession number CP000959 (circular; 3,213,911 bp) (download entry)
• Chromosome 3 EMBL accession number CP000960 (circular; 1,224,595 bp) (download entry)
Reference(s):
[1] Copeland A., Lucas S., Lapidus A., Barry K., Bruce D., Goodwin L., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Tiedje J., Richardson P. ;
"Complete sequence of chromosome 1 of Burkholderia cenocepacia MC0-3.";
Submitted (FEB-2008) to the EMBL/GenBank/DDBJ databases.
[2] Copeland A., Lucas S., Lapidus A., Barry K., Bruce D., Goodwin L., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Tiedje J., Richardson P. ;
"Complete sequence of chromosome 2 of Burkholderia cenocepacia MC0-3.";
Submitted (FEB-2008) to the EMBL/GenBank/DDBJ databases.
[3] Copeland A., Lucas S., Lapidus A., Barry K., Bruce D., Goodwin L., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Tiedje J., Richardson P. ;
"Complete sequence of chromosome 3 of Burkholderia cenocepacia MC0-3.";
Submitted (FEB-2008) to the EMBL/GenBank/DDBJ databases.
Web links:
Official genome site(s):
http://genome.jgi-psf.org/finished_microbes/burc3/burc3.home.html
Other web sites:
Entrez Genome Project: http://www.ncbi.nlm.nih.gov/sites/entrez?Db=genomeprj&cmd=ShowDetailView&TermToSearch=17929
GIB (DDBJ): http://gib.genes.nig.ac.jp/single/index.php?spid=Bcen_MC03
 EBI Proteome Analysis page



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