HAMAP

HAMAP: Burkholderia phytofirmans (strain DSM 17436 / PsJN) complete proteome

General information

Species: Burkholderia phytofirmans (strain DSM 17436 / PsJN)

Species code:	BURPP
Taxonomy:	Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia (TaxID: 398527) [NEWT/ NCBI]
Description:	A plant growth-promoting rhizobacteria, Burkholderia phytofirmans was isolated from surface-sterilized onion roots in Nova Scotia, Canada, and has been shown to be beneficial to a number of plants such as potato, tomato and grapevine. In grapevine it has been shown to colonize most of the plant, starting from a root inoculate. This endophyte also confers mild pathogen resistance. It is the type strain for the species (adapted from http://genome.jgi-psf.org/burpp/burpp.home.html).
Properties:	Presence of flagella: Yes Human pathogen: No Interaction: Plant endophyte Number of membranes: 2 Number of inteins:0
Statistics:	Number of BURPP entries in the UniProt Knowledgebase: 7197 (338 in UniProtKB/Swiss-Prot + 6859 in UniProtKB/TrEMBL)

Genome(s) sequenced

Strain: DSM 17436 / PsJN

Genome structure:

Reference(s):

[1]	Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Lang D., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Nowak J., Sessitsch A., Lazarovits G., Compant S., Barka E., Tiedje J. ; "Complete sequence of chromosome 1 of Burkholderia phytofirmans PsJN."; Submitted (MAY-2008) to the EMBL/GenBank/DDBJ databases.
[2]	Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Lang D., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Nowak J., Sessitsch A., Lazarovits G., Compant S., Barka E., Tiedje J. ; "Complete sequence of chromosome 2 of Burkholderia phytofirmans PsJN."; Submitted (MAY-2008) to the EMBL/GenBank/DDBJ databases.
[3]	Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Lang D., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Nowak J., Sessitsch A., Lazarovits G., Compant S., Barka E., Tiedje J. ; "Complete sequence of plasmid 1 of Burkholderia phytofirmans PsJN."; Submitted (MAY-2008) to the EMBL/GenBank/DDBJ databases.

Web links:

Official genome site(s):

http://genome.jgi-psf.org/burpp/burpp.home.html

Other web sites:
Entrez Genome Project:	http://www.ncbi.nlm.nih.gov/sites/entrez?Db=genomeprj&cmd=ShowDetailView&TermToSearch=17463
GIB (DDBJ):	http://gib.genes.nig.ac.jp/single/index.php?spid=Bphy_PsJN

EBI Proteome Analysis page

Tools

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