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HAMAP: Chlorobium limicola (strain DSM 245 / NBRC 103803) complete proteome
General information

Species:  Chlorobium limicola (strain DSM 245 / NBRC 103803)
Species code: CHLL2
Taxonomy: Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chlorobium/Pelodictyon group; Chlorobium (TaxID: 290315) [NEWT/ NCBI]
Description: Chlorobium limicola is a green sulfur bacteria. Cells are rod-shaped, approximately 1.0 um wide and non-motile. Photosynthetic pigments are BChl c with chlorobactene as the major carotenoid, or in some strains, BChl e with isorenieratene. Photoautotrophic growth occurs with sulfide and sulfur as photosynthetic electron donors; molecular hydrogen and thiosulfate may be used. In the presence of sulfide and bicarbonate, some simple organic compounds are photoassimilated. Freshwater bacteria without a requirement for sodium chloride. Vitamin B12 is not required for growth. This is the type strain (adapted from PubMed 12892110).
Properties: Presence of flagella: No
Human pathogen: No
Interaction: No
Number of membranes: 2
Number of inteins:0
Statistics: Number of CHLL2 entries in the UniProt Knowledgebase: 2419 (238 in UniProtKB/Swiss-Prot + 2181 in UniProtKB/TrEMBL)


Genome(s) sequenced

Strain:    DSM 245 / NBRC 103803
Genome structure:
Chromosome EMBL accession number CP001097 (circular; 2,763,181 bp) (download entry)
Reference(s):
[1] Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Ovchinnikova G., Zhao F., Li T., Liu Z., Overmann J., Bryant D.A., Richardson P. ;
"Complete sequence of Chlorobium limicola DSM 245.";
Submitted (MAY-2008) to the EMBL/GenBank/DDBJ databases.
Web links:
Official genome site(s):
http://genome.jgi-psf.org/chlli/chlli.home.html
Other web sites:
Entrez Genome Project: http://www.ncbi.nlm.nih.gov/sites/entrez?Db=genomeprj&cmd=ShowDetailView&TermToSearch=12606
GIB (DDBJ): http://gib.genes.nig.ac.jp/single/index.php?spid=Clim_DSM245
 EBI Proteome Analysis page



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