Home | Contact

Species code:	CHLMU
Taxonomy:	Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia (TaxID: 83560) [NEWT/ NCBI]
Description:	Obligate intracellular parasite depending on the host machinery for ATP synthesis. Chlamydial life cycle comprehends an intracellular metabolically- active "reticular body" and an inert extracellular spore-like "elementary body" equipped with a unique disulfide-cross-linked protein envelope.
Properties:	Presence of flagella: No Human pathogen: No Interaction: Animal pathogen in Mammalia (intracellular obligate) Number of membranes: 2 Number of inteins:0
Statistics:	Number of CHLMU entries in the UniProt Knowledgebase: 915 (412 in UniProtKB/Swiss-Prot + 503 in UniProtKB/TrEMBL)

Genome structure:	• Chromosome EMBL accession number AE002160 (circular; 1,072,950 bp) (download entry) • Plasmid pMoPn EMBL accession number AE002162 (circular; 7,501 bp) (download entry)
Reference(s):	[1] MEDLINE=20150255; PubMed=10684935; [ NCBI , EBI , Israel , Japan ] Read T.D., Brunham R.C., Shen C., Gill S.R., Heidelberg J.F., White O., Hickey E.K., Peterson J.D., Utterback T.R., Berry K.J., Bass S., Linher K.D., Weidman J.F., Khouri H.M., Craven B., Bowman C., Dodson R.J., Gwinn M.L., Nelson W.C., DeBoy R.T., Kolonay J.F., McClarty G., Salzberg S.L., Eisen J.A., Fraser C.M. ; "Genome sequences of Chlamydia trachomatis MoPn and Chlamydia pneumoniae AR39."; Nucleic Acids Res. 28:1397-1406(2000).
Web links:	CBS: http://www.cbs.dtu.dk/services/GenomeAtlas/show-genus.php?kingdom=Bacteria&GLgenus=Chlamydia&GLspecies=muridarum&GLstrain=Nigg Entrez Genome Project: http://www.ncbi.nlm.nih.gov/sites/entrez?Db=genomeprj&Cmd=DetailsSearch&Term=txid243161%5Borgn%5D GIB (DDBJ): http://gib.genes.nig.ac.jp/single/index.php?spid=Ctra_MOPN JVCI CMR: http://cmr.jcvi.org/tigr-scripts/CMR/GenomePage.cgi?database=btc Karyn's Genomes: http://www.ebi.ac.uk/2can/genomes/bacteria/Chlamydia_muridarum.html NMPDR: http://www.nmpdr.org/FIG/wiki/rest.cgi/NmpdrPlugin/SeedViewer?pattern=243161.4;page=SearchResult PEDANT: http://pedant.gsf.de/pedant3htmlview/pedant3view?Method=analysis&Db=p3_p229_Chl_murid  EBI Proteome Analysis page

• Perform a BLAST search against all proteins from this proteome
  
  
• Download all UniProt Knowledgebase entries of this proteome
  • in UniProt Knowledgebase format
  • in FASTA format
  
  
• Retrieve set of characterized or identified proteins for this proteome
  
  
• Retrieve set of proteins with 3D structure for this proteome

Swiss Institute of Bioinformatics | Disclaimer