HAMAP: Chlorobium tepidum complete proteome
General information

Species:  Chlorobium tepidum
Species code: CHLTE
Taxonomy: Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chlorobaculum (TaxID: 1097) [NEWT/ NCBI]
Description: Chlorobium tepidum is a Gram-negative bacterium of the green-sulfur phylum originally isolated from high-sulfide hot springs in New Zealand. It is thermophile and grows optimally at 48 Celsius degrees. It use multiple types of bacteriochlorophylls and carotenoids in unique structures known as chlorosomes for light harvesting.
Properties: Presence of flagella: No
Human pathogen: No
Interaction: No
Number of membranes: 2
Number of inteins:0
Statistics: Number of CHLTE entries in the UniProt Knowledgebase: 2250 (416 in UniProtKB/Swiss-Prot + 1834 in UniProtKB/TrEMBL)


Genome(s) sequenced

Strain:    ATCC 49652 / DSM 12025 / TLS
Genome structure:
Chromosome EMBL accession number AE006470 (circular; 2,154,946 bp) (download entry)
Reference(s):
[1] MEDLINE=22103685; PubMed=12093901; [ NCBI , EBI , Israel , Japan ]
Eisen J.A., Nelson K.E., Paulsen I.T., Heidelberg J.F., Wu M., Dodson R.J., DeBoy R.T., Gwinn M.L., Nelson W.C., Haft D.H., Hickey E.K., Peterson J.D., Durkin A.S., Kolonay J.F., Yang F., Holt I.E., Umayam L.A., Mason T.M., Brenner M., Shea T.P., Parksey D.S., Nierman W.C., Feldblyum T.V., Hansen C.L., Craven M.B., Radune D., Vamathevan J.J., Khouri H.M., White O., Gruber T.M., Ketchum K.A., Venter J.C., Tettelin H., Bryant D.A., Fraser C.M. ;
"The complete genome sequence of Chlorobium tepidum TLS, a photosynthetic, anaerobic, green-sulfur bacterium.";
Proc. Natl. Acad. Sci. U.S.A. 99:9509-9514(2002).
Web links:
CyanoBase: http://bacteria.kazusa.or.jp/cyanobase/Chlorobium/index.html
Entrez Genome Project: http://www.ncbi.nlm.nih.gov/sites/entrez?Db=genomeprj&Cmd=DetailsSearch&Term=txid194439%5Borgn%5D
Genome Atlas: http://www.cbs.dtu.dk/services/gwBrowser/project.php?pid=302
GIB (DDBJ): http://gib.genes.nig.ac.jp/single/index.php?spid=Ctep_TLS
JVCI CMR: http://cmr.jcvi.org/tigr-scripts/CMR/GenomePage.cgi?database=gct
Karyn's Genomes: http://www.ebi.ac.uk/2can/genomes/bacteria/Chlorobium_tepidum.html
PEDANT: http://pedant.gsf.de/pedant3htmlview/pedant3view?Method=analysis&Db=p3_p302_Chl_tepid
 EBI Proteome Analysis page



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