HAMAP: Desulfotalea psychrophila complete proteome
General information

Species:  Desulfotalea psychrophila
Species code: DESPS
Taxonomy: Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfotalea (TaxID: 84980) [NEWT/ NCBI]
Description: Desulfotalea psychrophila is a marine Gram-negative sulfate-reducing bacterium. It was isolated from permanently cold Arctic sediments off the coast of Svalbard. Its optimal growth temperature is 10 degrees Celsius but it is also able to grow at temperatures as low as -1.8 degrees Celsius. Psychrophilic sulfate-reducing bacteria are assumed to contribute significantly to the carbon and sulfur cycles.
Properties: Presence of flagella: Yes
Human pathogen: No
Interaction: No
Number of membranes: 2
Number of inteins:0
Statistics: Number of DESPS entries in the UniProt Knowledgebase: 3233 (320 in UniProtKB/Swiss-Prot + 2913 in UniProtKB/TrEMBL)


Genome(s) sequenced

Strain:    LSv54 / DSM 12343
Genome structure:
• Chromosome EMBL accession number CR522870 (circular; 3,523,383 bp) (download entry)
• Plasmid large EMBL accession number CR522871 (circular; 121,587 bp) (download entry)
• Plasmid small EMBL accession number CR522872 (circular; 14,664 bp) (download entry)
Reference(s):
[1] PubMed=15305914; [ NCBI , EBI , Israel , Japan ]
Rabus R., Ruepp A., Frickey T., Rattei T., Fartmann B., Stark M., Bauer M., Zibat A., Lombardot T., Becker I., Amann J., Gellner K., Teeling H., Leuschner W.D., Gloeckner F.-O., Lupas A.N., Amann R., Klenk H.-P. ;
"The genome of Desulfotalea psychrophila, a sulfate-reducing bacterium from permanently cold Arctic sediments.";
Environ. Microbiol. 6:887-902(2004).
Web links:
Official genome site(s):
http://www.mpi-bremen.de/en/Projects_6.html
http://www.regx.de/m_organisms.php#srb
Other web sites:
CBS: http://www.cbs.dtu.dk/services/GenomeAtlas/show-genus.php?kingdom=Bacteria&GLgenus=Desulfotalea&GLspecies=psychrophila&GLstrain=LSv54
Entrez Genome Project: http://www.ncbi.nlm.nih.gov/sites/entrez?Db=genomeprj&Cmd=DetailsSearch&Term=txid177439%5Borgn%5D
GIB (DDBJ): http://gib.genes.nig.ac.jp/single/index.php?spid=Dpsy_LSV54
JVCI CMR: http://cmr.jcvi.org/tigr-scripts/CMR/GenomePage.cgi?database=ntdp01
Karyn's Genomes: http://www.ebi.ac.uk/2can/genomes/bacteria/Desulfotalea_psychrophila.html
PEDANT: http://pedant.gsf.de/pedant3htmlview/pedant3view?Method=analysis&Db=p3_p12751_Des_psych
 EBI Proteome Analysis page



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