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HAMAP: Desulfotomaculum reducens (strain MI-1) complete proteome
General information

Species:  Desulfotomaculum reducens (strain MI-1)
Species code: DESRM
Taxonomy: Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum (TaxID: 349161) [NEWT/ NCBI]
Description: Desulfotomaculum reducens (strain MI-1) is a moderately halophilic anaerobic bacterium phylogenetically associated with the Firmicutes. Desulfotomaculum reducens was isolated from heavy metal-contaminated sediment collected at the Mare Island Naval Shipyard on the San Francisco Bay. Desulfotomaculum reducens is able to reduce uranium and chromium making it a potential agent for the bioremediation of heavy metals. The genome sequence of this organism will provide information on the mechanism and regulation of heavy metal reduction.
Properties: Presence of flagella: Yes
Human pathogen: No
Interaction: No
Number of membranes: 1
Number of inteins:0
Statistics: Number of DESRM entries in the UniProt Knowledgebase: 3220 (283 in UniProtKB/Swiss-Prot + 2937 in UniProtKB/TrEMBL)


Genome(s) sequenced

Strain:    MI-1
Genome structure:
Chromosome EMBL accession number CP000612 (circular; 3,608,104 bp) (download entry)
Reference(s):
[1] Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Sims D., Brettin T., Bruce D., Han C., Tapia R., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Kim E., Tebo B.M., Richardson P. ;
"Complete sequence of Desulfotomaculum reducens MI-1.";
Submitted (MAR-2007) to the EMBL/GenBank/DDBJ databases.
Web links:
Official genome site(s):
http://genome.jgi-psf.org/finished_microbes/desre/desre.home.html
Other web sites:
Entrez Genome Project: http://www.ncbi.nlm.nih.gov/sites/entrez?Db=genomeprj&cmd=ShowDetailView&TermToSearch=13424
Genome Atlas: http://www.cbs.dtu.dk/services/gwBrowser/project.php?pid=13424
GIB (DDBJ): http://gib.genes.nig.ac.jp/single/index.php?spid=Dred_MI1
PEDANT: http://pedant.gsf.de/pedant3htmlview/pedant3view?Method=analysis&Db=p3_p13424_Des_reduc
 EBI Proteome Analysis page



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