HAMAP: Erwinia carotovora subsp. atroseptica (Pectobacterium atrosepticum) complete proteome
General information

Species:  Erwinia carotovora subsp. atroseptica (Pectobacterium atrosepticum)
Species code: ERWCT
Taxonomy: Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pectobacterium (TaxID: 29471) [NEWT/ NCBI]
Description: The genus Erwinia currently contains both pathogenic and nonpathogenic bacteria. Erwinia carotovora subsp. atroseptica strain SCRI 1043 is a commercially important pathogen restricted to potato in temperate regions. It is the causative agent of blackleg in the field and soft rot of tubers after harvest.
Properties: Presence of flagella: not known
Human pathogen: No
Interaction: Plant pathogen
Number of membranes: 2
Number of inteins:0
Statistics: Number of ERWCT entries in the UniProt Knowledgebase: 4459 (782 in UniProtKB/Swiss-Prot + 3677 in UniProtKB/TrEMBL)


Genome(s) sequenced

Strain:    SCRI 1043 / ATCC BAA-672
Genome structure:
Chromosome EMBL accession number BX950851 (circular; 5,064,019 bp) (download entry)
Reference(s):
[1] PubMed=15263089; [ NCBI , EBI , Israel , Japan ]
Bell K.S., Sebaihia M., Pritchard L., Holden M.T.G., Hyman L.J., Holeva M.C., Thomson N.R., Bentley S.D., Churcher L.J.C., Mungall K., Atkin R., Bason N., Brooks K., Chillingworth T., Clark K., Doggett J., Fraser A., Hance Z., Hauser H., Jagels K., Moule S., Norbertczak H., Ormond D., Price C., Quail M.A., Sanders M., Walker D., Whitehead S., Salmond G.P.C., Birch P.R.J., Parkhill J., Toth I.K. ;
"Genome sequence of the enterobacterial phytopathogen Erwinia carotovora subsp. atroseptica and characterization of virulence factors.";
Proc. Natl. Acad. Sci. U.S.A. 101:11105-11110(2004).
Web links:
Official genome site(s):
http://www.sanger.ac.uk/Projects/E_carotovora/
Other web sites:
CBS: http://www.cbs.dtu.dk/services/GenomeAtlas/show-genus.php?kingdom=Bacteria&GLgenus=Erwinia&GLspecies=carotovora&GLstrain=SCRI1043
Entrez Genome Project: http://www.ncbi.nlm.nih.gov/sites/entrez?Db=genomeprj&Cmd=DetailsSearch&Term=txid218491%5Borgn%5D
ERIC: http://www.ericbrc.org/portal/eric/pectobacteriumatrosepticumscri1043
GIB (DDBJ): http://gib.genes.nig.ac.jp/single/index.php?spid=Ecar_SCRI1043
GOLD: http://genomesonline.org/cgi-bin/GOLD/bin/GOLDCards.cgi?goldstamp=Gc00202
JVCI CMR: http://cmr.jcvi.org/tigr-scripts/CMR/GenomePage.cgi?database=ntec06
PEDANT: http://pedant.gsf.de/pedant3htmlview/pedant3view?Method=analysis&Db=p3_p350_Erw_carot
 EBI Proteome Analysis page



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