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HAMAP: Francisella philomiragia subsp. philomiragia (strain ATCC 25017) complete proteome
General information

Species:  Francisella philomiragia subsp. philomiragia (strain ATCC 25017)
Species code: FRAP2
Taxonomy: Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Francisellaceae; Francisella (TaxID: 484022) [NEWT/ NCBI]
Description: Francisella philomiragia, originally called Yersinia philomiragia, has been isolated from muskrats, river water, cod and humans. Based on 16S rRNA studies it was renamed F.philomiragia and split into 2 subspecies, philomiragia (for the mammalian isolates) and noatunensis (for the fish isolates). The type strain F.philomiragia subsp. philomiragia ATCC 25015 is non-motile and aerobic. F. philomiragia subsp. philomiragia ATCC 25017 was isolated from fresh water in the Bear River Migratory Bird Refuge, Utah, USA.
Properties: Presence of flagella: No
Human pathogen: Rarely
Interaction: Animal pathogen in Mammalia
Number of membranes: 2
Number of inteins:0
Statistics: Number of FRAP2 entries in the UniProt Knowledgebase: 1875 (250 in UniProtKB/Swiss-Prot + 1625 in UniProtKB/TrEMBL)


Genome(s) sequenced

Strain:    ATCC 25017
Genome structure:
• Chromosome EMBL accession number CP000937 (circular; 2,045,775 bp) (download entry)
• Plasmid pFPHI01 EMBL accession number CP000938 (circular; 3,936 bp) (download entry)
Reference(s):
[1] Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M., Hauser L., Richardson P. ;
"Complete sequence of chromosome of Francisella philomiragia subsp. philomiragia ATCC 25017.";
Submitted (DEC-2007) to the EMBL/GenBank/DDBJ databases.
[2] Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M., Hauser L., Richardson P. ;
"Complete sequence of plasmid of Francisella philomiragia subsp. philomiragia ATCC 25017.";
Submitted (DEC-2007) to the EMBL/GenBank/DDBJ databases.
Web links:
Official genome site(s):
http://genome.jgi-psf.org/finished_microbes/fraph/fraph.info.html
Other web sites:
Entrez Genome Project: http://www.ncbi.nlm.nih.gov/sites/entrez?Db=genomeprj&cmd=ShowDetailView&TermToSearch=27853
GIB (DDBJ): http://gib.genes.nig.ac.jp/single/index.php?spid=Fphi_ATCC25017
 EBI Proteome Analysis page



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