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HAMAP: Gloeobacter violaceus (strain PCC 7421) complete proteome
General information

Species:  Gloeobacter violaceus (strain PCC 7421)
Species code: GLOVI
Taxonomy: Bacteria; Cyanobacteria; Gloeobacteria; Gloeobacterales; Gloeobacter (TaxID: 251221) [NEWT/ NCBI]
Description: Gloeobacter violaceus PCC 7421 is a rod-shaped cyanobacterium isolated from calcareous rock in Switzerland. It is an obligate photoautotroph, sensitive to strong light and it has a relatively long generation time.
Properties: Presence of flagella: No
Human pathogen: No
Interaction: No
Number of membranes: 2
Number of inteins: 2 in 2 different sequences
Statistics: Number of GLOVI entries in the UniProt Knowledgebase: 4406 (436 in UniProtKB/Swiss-Prot + 3970 in UniProtKB/TrEMBL)


Genome(s) sequenced

Strain:    PCC 7421
Genome structure:
Chromosome EMBL accession number BA000045 (circular; 4,659,019 bp) (download entry)
Reference(s):
[1] MEDLINE=22977040; PubMed=14621292; [ NCBI , EBI , Israel , Japan ]
Nakamura Y., Kaneko T., Sato S., Mimuro M., Miyashita H., Tsuchiya T., Sasamoto S., Watanabe A., Kawashima K., Kishida Y., Kiyokawa C., Kohara M., Matsumoto M., Matsuno A., Nakazaki N., Shimpo S., Takeuchi C., Yamada M., Tabata S. ;
"Complete genome structure of Gloeobacter violaceus PCC 7421, a cyanobacterium that lacks thylakoids.";
DNA Res. 10:137-145(2003).
Web links:
Official genome site(s):
http://bacteria.kazusa.or.jp/cyanobase/Gloeobacter/index.html
Other web sites:
Entrez Genome Project: http://www.ncbi.nlm.nih.gov/sites/entrez?Db=genomeprj&Cmd=DetailsSearch&Term=txid251221%5Borgn%5D
Genome Atlas: http://www.cbs.dtu.dk/services/gwBrowser/project.php?pid=9606
GIB (DDBJ): http://gib.genes.nig.ac.jp/single/index.php?spid=Gvio_PCC7421
JVCI CMR: http://cmr.jcvi.org/tigr-scripts/CMR/GenomePage.cgi?database=ntgv01
Karyn's Genomes: http://www.ebi.ac.uk/2can/genomes/bacteria/Gloeobacter_violaceus.html
PEDANT: http://pedant.gsf.de/pedant3htmlview/pedant3view?Method=analysis&Db=p3_p9606_Glo_viola
 EBI Proteome Analysis page



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