HAMAP: Listeria innocua complete proteome
General information

Species:  Listeria innocua
Species code: LISIN
Taxonomy: Bacteria; Firmicutes; Bacillales; Listeriaceae; Listeria (TaxID: 1642) [NEWT/ NCBI]
Description: Listeria are Gram-positive, motile, facultative anaerobic bacteria; Listeria innocua ia one of the non pathogenic species of the genus.
Properties: Presence of flagella: Yes
Human pathogen: No
Interaction: No
Number of membranes: 1
Number of inteins:0
Statistics: Number of LISIN entries in the UniProt Knowledgebase: 3018 (590 in UniProtKB/Swiss-Prot + 2428 in UniProtKB/TrEMBL)


Genome(s) sequenced

Strain:    CLIP 11262 / Serovar 6a
Genome structure:
• Chromosome EMBL accession number AL592022 (circular; 3,011,208 bp) (download entry)
• Plasmid pLI100 EMBL accession number AL592102 (circular; 81,905 bp) (download entry)
Reference(s):
[1] MEDLINE=21537279; PubMed=11679669; [ NCBI , EBI , Israel , Japan ]
Glaser P., Frangeul L., Buchrieser C., Rusniok C., Amend A., Baquero F., Berche P., Bloecker H., Brandt P., Chakraborty T., Charbit A., Chetouani F., Couve E., de Daruvar A., Dehoux P., Domann E., Dominguez-Bernal G., Duchaud E., Durant L., Dussurget O., Entian K.-D., Fsihi H., Garcia-del Portillo F., Garrido P., Gautier L., Goebel W., Gomez-Lopez N., Hain T., Hauf J., Jackson D., Jones L.-M., Kaerst U., Kreft J., Kuhn M., Kunst F., Kurapkat G., Madueno E., Maitournam A., Mata Vicente J., Ng E., Nedjari H., Nordsiek G., Novella S., de Pablos B., Perez-Diaz J.-C., Purcell R., Remmel B., Rose M., Schlueter T., Simoes N., Tierrez A., Vazquez-Boland J.-A., Voss H., Wehland J., Cossart P. ;
"Comparative genomics of Listeria species.";
Science 294:849-852(2001).
Web links:
Official genome site(s):
http://genodb.pasteur.fr/cgi-bin/WebObjects/GenoList.woa/13/wa/goToTaxoRank?level=Listeria
Other web sites:
CBS: http://www.cbs.dtu.dk/services/GenomeAtlas/show-genus.php?kingdom=Bacteria&GLgenus=Listeria&GLspecies=innocua&GLstrain=Clip11262
Entrez Genome Project: http://www.ncbi.nlm.nih.gov/sites/entrez?Db=genomeprj&Cmd=DetailsSearch&Term=txid272626%5Borgn%5D
GIB (DDBJ): http://gib.genes.nig.ac.jp/single/index.php?spid=Linn_CLIP11262
GOLD: http://genomesonline.org/cgi-bin/GOLD/bin/GOLDCards.cgi?goldstamp=Gc00068
JVCI CMR: http://cmr.jcvi.org/tigr-scripts/CMR/GenomePage.cgi?database=ntli01
Karyn's Genomes: http://www.ebi.ac.uk/2can/genomes/bacteria/Listeria_innocua.html
NMPDR: http://www.nmpdr.org/FIG/wiki/rest.cgi/NmpdrPlugin/SeedViewer?pattern=272626.1;page=SearchResult
PEDANT: http://pedant.gsf.de/pedant3htmlview/pedant3view?Method=analysis&Db=p3_p86_Lis_innoc
 EBI Proteome Analysis page



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