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HAMAP: Methanococcus maripaludis (strain S2 / LL) complete proteome
General information

Species:  Methanococcus maripaludis (strain S2 / LL)
Species code: METMP
Taxonomy: Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanococcaceae; Methanococcus (TaxID: 267377) [NEWT/ NCBI]
Description: Mesophilic hydrogenotrophic, nitrogen-fixing methanogen that was isolated from a salt-marsh sediment. It is an excellent laboratory model because of rapid, reliable growth, a robust set of genetic tools and the availability of expression arrays and proteomics data.
Properties: Presence of flagella: Yes
Human pathogen: No
Interaction: No
Number of membranes: 1
Number of inteins:0
Statistics: Number of METMP entries in the UniProt Knowledgebase: 1722 (348 in UniProtKB/Swiss-Prot + 1374 in UniProtKB/TrEMBL)


Genome(s) sequenced

Strain:    S2 / LL
Genome structure:
Chromosome EMBL accession number BX950229 (circular; 1,661,137 bp) (download entry)
Reference(s):
[1] PubMed=15466049; [ NCBI , EBI , Israel , Japan ]
Hendrickson E.L., Kaul R., Zhou Y., Bovee D., Chapman P., Chung J., Conway de Macario E., Dodsworth J.A., Gillett W., Graham D.E., Hackett M., Haydock A.K., Kang A., Land M.L., Levy R., Lie T.J., Major T.A., Moore B.C., Porat I., Palmeiri A., Rouse G., Saenphimmachak C., Soell D., Van Dien S., Wang T., Whitman W.B., Xia Q., Zhang Y., Larimer F.W., Olson M.V., Leigh J.A. ;
"Complete genome sequence of the genetically tractable hydrogenotrophic methanogen Methanococcus maripaludis.";
J. Bacteriol. 186:6956-6969(2004).
Web links:
Official genome site(s):
http://faculty.washington.edu/leighj/mm.html
Other web sites:
CBS: http://www.cbs.dtu.dk/services/GenomeAtlas/show-genus.php?kingdom=Archaea&GLgenus=Methanococcus&GLspecies=maripaludis&GLstrain=S2
Entrez Genome Project: http://www.ncbi.nlm.nih.gov/sites/entrez?Db=genomeprj&Cmd=DetailsSearch&Term=txid39152%5Borgn%5D
GIB (DDBJ): http://gib.genes.nig.ac.jp/single/index.php?spid=Mmar_S2
JVCI CMR: http://cmr.jcvi.org/tigr-scripts/CMR/GenomePage.cgi?database=ntmm04
Karyn's Genomes: http://www.ebi.ac.uk/2can/genomes/archaea/Methanococcus_maripaludis.html
PEDANT: http://pedant.gsf.de/pedant3htmlview/pedant3view?Method=analysis&Db=p3_p10632_Met_marip
 EBI Proteome Analysis page



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