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HAMAP: Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) complete proteome
General information

Species:  Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c)
Species code: METPE
Taxonomy: Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Genera incertae sedis; Methanosphaerula (TaxID: 521011) [NEWT/ NCBI]
Description: Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) is an anaerobic, methanogenic archaeon isolated from an organically rich wetland in central New York State. This organism is highly sensitive to the concentration of sulfur in the soil. This is the first cultured representative of a novel methanoarchaeal group important in wetlands and bioreactors and is relevant to bioenergy and carbon sequestration (adapted from http://genome.jgi-psf.org/metpa/metpa.home.html).
Properties: Presence of flagella: Yes
Human pathogen: No
Interaction: No
Number of membranes: 1
Number of inteins:0
Statistics: Number of METPE entries in the UniProt Knowledgebase: 2655 (118 in UniProtKB/Swiss-Prot + 2537 in UniProtKB/TrEMBL)


Genome(s) sequenced

Strain:    ATCC BAA-1556 / DSM 19958 / E1-9c
Genome structure:
Chromosome EMBL accession number CP001338 (circular; 2,922,917 bp) (download entry)
Reference(s):
[1] Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Kiss H., Lu M., Brettin T., Detter J.C., Han C., Larimer F., Land M., Hauser L., Kyrpides N., Ovchinnikova G.O., Zinder S. ;
"Complete sequence of Candidatus Methanosphaerula E1-9c.";
Submitted (DEC-2008) to the EMBL/GenBank/DDBJ databases.
Web links:
Official genome site(s):
http://genome.jgi-psf.org/metpa/metpa.home.html
Other web sites:
Entrez Genome Project: http://www.ncbi.nlm.nih.gov/sites/entrez?Db=genomeprj&cmd=ShowDetailView&TermToSearch=29381
Genome Atlas: http://www.cbs.dtu.dk/services/gwBrowser/project.php?pid=29381
GIB (DDBJ): http://gib.genes.nig.ac.jp/single/index.php?spid=Mpal_E19c
 EBI Proteome Analysis page



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