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HAMAP: Mycobacterium vanbaalenii (strain DSM 7251 / PYR-1) complete proteome
General information

Species:  Mycobacterium vanbaalenii (strain DSM 7251 / PYR-1)
Species code: MYCVP
Taxonomy: Bacteria; Actinobacteria; Actinobacteridae; Actinomycetales; Corynebacterineae; Mycobacteriaceae; Mycobacterium (TaxID: 350058) [NEWT/ NCBI]
Description: Mycobacterium vanbaalenii (strain DSM 7251 / PYR-1) was originally isolated from oil-contaminated sediment based on its ability to degrade pyrene, a polycyclic aromatic hydrocarbon (PAH). It can also degrade or transform biphenyl, naphthalene, anthracene, fluoranthene, 1-nitropyrene, phenanthrene, benzo[a]pyrene, benz[a]anthracene, and 7,12-dimethylbenz[a]anthracene. It is considered as a potential candidate for bioremediation of PAH-contaminated areas.
Properties: Presence of flagella: No
Human pathogen: No
Interaction: No
Number of membranes: 1
Number of inteins: 1
Statistics: Number of MYCVP entries in the UniProt Knowledgebase: 5902 (325 in UniProtKB/Swiss-Prot + 5577 in UniProtKB/TrEMBL)


Genome(s) sequenced

Strain:    DSM 7251 / PYR-1
Genome structure:
Chromosome EMBL accession number CP000511 (circular; 6,491,865 bp) (download entry)
Reference(s):
[1] Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Singan V., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Anderson I.J., Miller C., Richardson P. ;
"Complete sequence of Mycobacterium vanbaalenii PYR-1.";
Submitted (DEC-2006) to the EMBL/GenBank/DDBJ databases.
Web links:
Entrez Genome Project: http://www.ncbi.nlm.nih.gov/sites/entrez?Db=genomeprj&Cmd=DetailsSearch&Term=txid350058%5Borgn%5D
Genome Atlas: http://www.cbs.dtu.dk/services/gwBrowser/precalc/project.php?pid=15761
GIB (DDBJ): http://gib.genes.nig.ac.jp/single/index.php?spid=Mvan_PYR1
GOLD: http://genomesonline.org/GOLD_CARDS/Gc00479.html
PEDANT: http://pedant.gsf.de/pedant3htmlview/pedant3view?Method=analysis&Db=p3_p15761_Myc_vanba
 EBI Proteome Analysis page



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