HAMAP: Nitrosopumilus maritimus (strain SCM1) complete proteome
General information

Species:  Nitrosopumilus maritimus (strain SCM1)
Species code: NITMS
Taxonomy: Archaea; Thaumarchaeota; marine archaeal group 1; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus (TaxID: 436308) [NEWT/ NCBI]
Description: Nitrosopumilus maritimus (strain SCM1) is an autotrophic ammonia-oxidizing archaeon isolated from a salt-water aquarium. This organism is able to fix carbon and oxidize ammonium aerobically to nitrite.
Properties: Presence of flagella: No
Human pathogen: No
Interaction: No
Number of membranes: 1
Number of inteins:0
Statistics: Number of NITMS entries in the UniProt Knowledgebase: 1795 (85 in UniProtKB/Swiss-Prot + 1710 in UniProtKB/TrEMBL)


Genome(s) sequenced

Strain:    SCM1
Genome structure:
Chromosome EMBL accession number CP000866 (circular; 1,645,259 bp) (download entry)
Reference(s):
[1] Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Lykidis A., Stahl D., Richardson P. ;
"Complete sequence of Nitrosopumilus maritimus SCM1.";
Submitted (OCT-2007) to the EMBL/GenBank/DDBJ databases.
Web links:
Official genome site(s):
http://genome.jgi-psf.org/finished_microbes/nitma/nitma.home.html
Other web sites:
Entrez Genome Project: http://www.ncbi.nlm.nih.gov/sites/entrez?Db=genomeprj&cmd=ShowDetailView&TermToSearch=19265
Genome Atlas: http://www.cbs.dtu.dk/services/gwBrowser/project.php?pid=19265
GIB (DDBJ): http://gib.genes.nig.ac.jp/single/index.php?spid=Nmar_SCM1
PEDANT: http://pedant.gsf.de/pedant3htmlview/pedant3view?Method=analysis&Db=p3_p19265_Nit_marit
 EBI Proteome Analysis page



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