Home | Contact

Species code:	NITWN
Taxonomy:	Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter (TaxID: 323098) [NEWT/ NCBI]
Description:	Nitrobacter winogradskyi lives in soils, fresh water or marine environments. It uses inorganic compounds as energy sources. It oxidizes ammonia to nitrite and nitrite to an end product of nitrate.
Properties:	Presence of flagella: Yes Human pathogen: No Interaction: No Number of membranes: 2 Number of inteins:0
Statistics:	Number of NITWN entries in the UniProt Knowledgebase: 2980 (345 in UniProtKB/Swiss-Prot + 2635 in UniProtKB/TrEMBL)

Genome structure:	Chromosome EMBL accession number CP000115 (circular; 3,402,093 bp) (download entry)
Reference(s):	[1] PubMed=16517654; [ NCBI , EBI , Israel , Japan ] Starkenburg S.R., Chain P.S.G., Sayavedra-Soto L.A., Hauser L., Land M.L., Larimer F.W., Malfatti S.A., Klotz M.G., Bottomley P.J., Arp D.J., Hickey W.J. ; "Genome sequence of the chemolithoautotrophic nitrite-oxidizing bacterium Nitrobacter winogradskyi Nb-255."; Appl. Environ. Microbiol. 72:2050-2063(2006).
Web links:	Official genome site(s): http://genome.jgi-psf.org/finished_microbes/nitwi/nitwi.home.html Other web sites: CBS: http://www.cbs.dtu.dk/services/GenomeAtlas/show-genus.php?kingdom=Bacteria&GLgenus=Nitrobacter&GLspecies=winogradskyi&GLsupStrain=Nb255 Nitrobacter Entrez Genome Project: http://www.ncbi.nlm.nih.gov/sites/entrez?Db=genomeprj&Cmd=DetailsSearch&Term=txid323098%5Borgn%5D GIB (DDBJ): http://gib.genes.nig.ac.jp/single/index.php?spid=Nwin_NB255 JVCI CMR: http://cmr.jcvi.org/tigr-scripts/CMR/GenomePage.cgi?database=ntnw01 PEDANT: http://pedant.gsf.de/pedant3htmlview/pedant3view?Method=analysis&Db=p3_p13474_Nit_winog RhizoDB: http://xbase.bham.ac.uk/rhizodb/genome.pl?id=1195  EBI Proteome Analysis page

• Perform a BLAST search against all proteins from this proteome
  
  
• Download all UniProt Knowledgebase entries of this proteome
  • in UniProt Knowledgebase format
  • in FASTA format
  
  
• Retrieve set of characterized or identified proteins for this proteome
  
  
• Retrieve set of proteins with 3D structure for this proteome

Swiss Institute of Bioinformatics | Disclaimer