HAMAP: Opitutus terrae (strain DSM 11246 / PB90-1) complete proteome
General information

Species:  Opitutus terrae (strain DSM 11246 / PB90-1)
Species code: OPITP
Taxonomy: Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus (TaxID: 452637) [NEWT/ NCBI]
Description: Opitutus terrae (strain DSM 11246 / PB90-1) is a member of the Verrucomicrobia, a diverse phylum of organisms common in many terrestrial and aquatic habitats. This organism was isolated from rice paddy soil and has been detected in peat bog soil and other anoxic terrestrial environments.
Properties: Presence of flagella: Yes
Human pathogen: No
Interaction: No
Number of membranes: 2
Number of inteins:0
Statistics: Number of OPITP entries in the UniProt Knowledgebase: 4588 (138 in UniProtKB/Swiss-Prot + 4450 in UniProtKB/TrEMBL)


Genome(s) sequenced

Strain:    DSM 11246 / PB90-1
Genome structure:
Chromosome EMBL accession number CP001032 (circular; 5,957,605 bp) (download entry)
Reference(s):
[1] Copeland A., Lucas S., Lapidus A., Glavina del Rio T., Pitluck S., Goltsman E., Clum A., Sun H., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Smidt H., Richardson P. ;
"Complete sequence of Opitutus terrae PB90-1.";
Submitted (APR-2008) to the EMBL/GenBank/DDBJ databases.
Web links:
EntrezGenome Project: http://www.ncbi.nlm.nih.gov/sites/entrez?Db=genomeprj&cmd=ShowDetailView&TermToSearch=19989
Genome Atlas: http://www.cbs.dtu.dk/services/gwBrowser/project.php?pid=19989
GIB (DDBJ): http://gib.genes.nig.ac.jp/single/index.php?spid=Oter_PB901
PEDANT: http://pedant.gsf.de/pedant3htmlview/pedant3view?Method=analysis&Db=p3_p19989_Opi_terra
 EBI Proteome Analysis page



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