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Species code:	PEDHD
Taxonomy:	Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter (TaxID: 485917) [NEWT/ NCBI]
Description:	Pedobacter heparinus DSM 2366, (also known as ATCC 13125, IFO 12017 and LMG 10399 among others) is a heparinase producing bacterium isolated from dry soil which prefers carbohydrates and sugars as carbon sources. It grows as Gram-negative rods ranging in size from 0.7 to 6 um long. It is obligately aerobic, does not sporulate and has gliding motility. It is interesting due to its ability to degrade acidic sulfated mucoheteropolysaccharides, like heparin and chondroitin that are formed in various animal tissues. It contains menaquinone MK-7 (adapted from PMIDs 9542086 and 21304637).
Properties:	Presence of flagella: No Human pathogen: No Interaction: No Number of membranes: 2 Number of inteins:0
Statistics:	Number of PEDHD entries in the UniProt Knowledgebase: 4249 (4 in UniProtKB/Swiss-Prot + 4245 in UniProtKB/TrEMBL)

Genome structure:	Chromosome EMBL accession number CP001681 (circular; 5,167,383 bp) (download entry)
Reference(s):	[1] PubMed=21304637; [ NCBI , EBI , Israel , Japan ] Han C., Spring S., Lapidus A., Del Rio T.G., Tice H., Copeland A., Cheng J.F., Lucas S., Chen F., Nolan M., Bruce D., Goodwin L., Pitluck S., Ivanova N., Mavromatis K., Mikhailova N., Pati A., Chen A., Palaniappan K., Land M., Hauser L., Chang Y.J., Jeffries C.C., Saunders E., Chertkov O., Brettin T., Goker M., Rohde M., Bristow J., Eisen J.A., Markowitz V., Hugenholtz P., Kyrpides N.C., Klenk H.P., Detter J.C. ; "Complete genome sequence of Pedobacter heparinus type strain (HIM 762-3)."; Stand. Genomic Sci. 1:54-62(2009).
Web links:	Official genome site(s): http://genome.jgi-psf.org/pedhe/pedhe.home.html Other web sites: Entrez Genome Project: http://www.ncbi.nlm.nih.gov/sites/entrez?Db=genomeprj&cmd=ShowDetailView&TermToSearch=27949 Genome Atlas: http://www.cbs.dtu.dk/services/gwBrowser/precalc/project.php?pid=27949 GIB (DDBJ): http://gib.genes.nig.ac.jp/single/index.php?spid=Phep_DSM2366  EBI Proteome Analysis page

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