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HAMAP: Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) complete proteome
General information

Species:  Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1)
Species code: PELCD
Taxonomy: Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Pelobacteraceae; Pelobacter (TaxID: 338963) [NEWT/ NCBI]
Description: Pelobacter carbinolicus is a Gram-negative Deltaproteobacterium. Pelobacter species are phylogenetically intertwined with Geobacter and Desulfuromonas species but the Pelobacter species lack several of the physiological characteristics of Geobacter and Desulfuromonas species. Functional analysis of the genome of P.carbinolicus is expected to provide important insights into the evolution of the Geobacteraceae, the predominant dissimilatory metal-reducing microorganisms in a diversity of sedimentary environments, as well as aid in elucidating the mechanisms for electron transfer to metals in Geobacteraceae and their syntrophic interactions.
Properties: Presence of flagella: Yes
Human pathogen: No
Interaction: No
Number of membranes: 2
Number of inteins:0
Statistics: Number of PELCD entries in the UniProt Knowledgebase: 3341 (364 in UniProtKB/Swiss-Prot + 2977 in UniProtKB/TrEMBL)


Genome(s) sequenced

Strain:    DSM 2380 / Gra Bd 1
Genome structure:
Chromosome EMBL accession number CP000142 (circular; 3,665,893 bp) (download entry)
Reference(s):
[1] Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina T., Hammon N., Israni S., Pitluck S., Chertkov O., Schmutz J., Larimer F., Land M., Kyrpides N., Ivanova N., Richardson P. ;
"Complete sequence of Pelobacter carbinolicus DSM 2380.";
Submitted (OCT-2005) to the EMBL/GenBank/DDBJ databases.
Web links:
Official genome site(s):
http://genome.jgi-psf.org/finished_microbes/pelca/pelca.home.html
Other web sites:
CBS: http://www.cbs.dtu.dk/services/GenomeAtlas/show-genus.php?kingdom=Bacteria&GLgenus=Pelobacter&GLspecies=carbinolicus&GLstrain=DSM2380
Entrez Genome Project: http://www.ncbi.nlm.nih.gov/sites/entrez?Db=genomeprj&Cmd=DetailsSearch&Term=txid338963%5Borgn%5D
GIB (DDBJ): http://gib.genes.nig.ac.jp/single/index.php?spid=Pcar_DSM2380
PEDANT: http://pedant.gsf.de/pedant3htmlview/pedant3view?Method=analysis&Db=p3_p13337_Pel_carbi
 EBI Proteome Analysis page



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