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HAMAP: Phenylobacterium zucineum (strain HLK1) complete proteome
General information

Species:  Phenylobacterium zucineum (strain HLK1)
Species code: PHEZH
Taxonomy: Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium (TaxID: 450851) [NEWT/ NCBI]
Description: The genus Phenylobacterium comprises 5 species, the first 4 of which were isolated from water or soil. Strain HLK1 was isolated from the human erythroleukemia cell line K562. It is a Gram-negative rod, motile with a polar flagellum that is strictly aerobic and nonfermentative. Its grows optimally at 37 degrees C between pH 6.5 and 7.5. It is a facultative intracellular organism and may have pathogenic relevance with humans and mammals, as it can infect at least HeLa cells. Unlike known intracellular pathogens, P. zucineum maintains a stable association with its host cell without apparently affecting the growth and morphology of the latter (modified from PubMed 16908113 and 18700039).
Properties: Presence of flagella: Yes
Human pathogen: not known
Interaction: Animal intracellular (facultative)
Number of membranes: 2
Number of inteins:0
Statistics: Number of PHEZH entries in the UniProt Knowledgebase: 3838 (201 in UniProtKB/Swiss-Prot + 3637 in UniProtKB/TrEMBL)


Genome(s) sequenced

Strain:    HLK1
Genome structure:
• Chromosome EMBL accession number CP000747 (circular; 3,996,255 bp) (download entry)
• Plasmid pHLK1 EMBL accession number CP000748 (circular; 382,976 bp) (download entry)
Reference(s):
[1] PubMed=18700039; [ NCBI , EBI , Israel , Japan ]
Luo Y., Xu X., Ding Z., Liu Z., Zhang B., Yan Z., Sun J., Hu S., Hu X. ;
"Complete genome of Phenylobacterium zucineum - a novel facultative intracellular bacterium isolated from human erythroleukemia cell line K562.";
BMC Genomics 9:386-386(2008).
Web links:
Entrez Genome Project: http://www.ncbi.nlm.nih.gov/sites/entrez?Db=genomeprj&cmd=ShowDetailView&TermToSearch=19931
GIB (DDBJ): http://gib.genes.nig.ac.jp/single/index.php?spid=Pzuc_HLK1
PEDANT: http://pedant.gsf.de/pedant3htmlview/pedant3view?Method=analysis&Db=p3_p19931_Phe_zucin
 EBI Proteome Analysis page



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