HAMAP: Ralstonia solanacearum (strain GMI1000) (Pseudomonas solanacearum) complete proteome
General information

Species:  Ralstonia solanacearum (strain GMI1000) (Pseudomonas solanacearum)
Species code: RALSO
Taxonomy: Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia (TaxID: 267608) [NEWT/ NCBI]
Description: Ralstonia solanacearum is a Gram-negative G+C rich bacterium. It is a widely distributed and economically important plant pathogen, that invades the roots of diverse plant hosts from the soil and aggressively colonizes the xylem vessels, causing a lethal wilting known as bacterial wilt disease.

Strain GMI1000 was isolated from a tomato plant in French Guyana and belongs to phylotype 1/sequevar I/18.
Properties: Presence of flagella: Yes
Human pathogen: No
Interaction: Plant pathogen
Number of membranes: 2
Number of inteins:0
Statistics: Number of RALSO entries in the UniProt Knowledgebase: 5022 (601 in UniProtKB/Swiss-Prot + 4421 in UniProtKB/TrEMBL)


Genome(s) sequenced

Strain:    GMI1000
Genome structure:
• Chromosome EMBL accession number AL646052 (circular; 3,716,413 bp) (download entry)
• Plasmid megaplasmid Rsp EMBL accession number AL646053 (circular; 2,094,509 bp) (download entry)
Reference(s):
[1] MEDLINE=21681879; PubMed=11823852; [ NCBI , EBI , Israel , Japan ]
Salanoubat M., Genin S., Artiguenave F., Gouzy J., Mangenot S., Arlat M., Billault A., Brottier P., Camus J.-C., Cattolico L., Chandler M., Choisne N., Claudel-Renard C., Cunnac S., Demange N., Gaspin C., Lavie M., Moisan A., Robert C., Saurin W., Schiex T., Siguier P., Thebault P., Whalen M., Wincker P., Levy M., Weissenbach J., Boucher C.A. ;
"Genome sequence of the plant pathogen Ralstonia solanacearum.";
Nature 415:497-502(2002).
Web links:
Official genome site(s):
http://bioinfo.genopole-toulouse.prd.fr/annotation/iANT/bacteria/ralsto/
Other web sites:
CBS: http://www.cbs.dtu.dk/services/GenomeAtlas/show-genus.php?kingdom=Bacteria&GLgenus=Ralstonia&GLspecies=solanacearum&GLstrain=GMI1000
Entrez Genome Project: http://www.ncbi.nlm.nih.gov/sites/entrez?Db=genomeprj&Cmd=DetailsSearch&Term=txid267608%5Borgn%5D
GIB (DDBJ): http://gib.genes.nig.ac.jp/single/index.php?spid=Rsol_GMI1000
JVCI CMR: http://cmr.jcvi.org/tigr-scripts/CMR/GenomePage.cgi?database=ntrs01
Pathema: http://pathema.jcvi.org/tigr-scripts/Burkholderia/shared/GenomePage.cgi?org=ntrs01
PEDANT: http://pedant.gsf.de/pedant3htmlview/pedant3view?Method=analysis&Db=p3_p13_Ral_solan
 EBI Proteome Analysis page



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