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HAMAP: Rhodopirellula baltica (strain SH1) complete proteome
General information

Species:  Rhodopirellula baltica (strain SH1)
Species code: RHOBA
Taxonomy: Bacteria; Planctomycetes; Planctomycetacia; Planctomycetales; Planctomycetaceae; Rhodopirellula (TaxID: 243090) [NEWT/ NCBI]
Description: Marine, aerobic representative of the Planctomycetales. They are found in phytodetrital macroaggregates in marine environments. Gains energy from the aerobic oxidation of mono- or disaccharides derived from the cleavage of sulfated polymers produced by algae.
Properties: Presence of flagella: Yes
Human pathogen: No
Interaction: No
Number of membranes: 2
Number of inteins:0
Statistics: Number of RHOBA entries in the UniProt Knowledgebase: 7271 (356 in UniProtKB/Swiss-Prot + 6915 in UniProtKB/TrEMBL)


Genome(s) sequenced

Strain:    SH1
Genome structure:
Chromosome EMBL accession number BX119912 (circular; 7,145,576 bp) (download entry)
Reference(s):
[1] MEDLINE=22735913; PubMed=12835416; [ NCBI , EBI , Israel , Japan ]
Gloeckner F.O., Kube M., Bauer M., Teeling H., Lombardot T., Ludwig W., Gade D., Beck A., Borzym K., Heitmann K., Rabus R., Schlesner H., Amann R., Reinhardt R. ;
"Complete genome sequence of the marine planctomycete Pirellula sp. strain 1.";
Proc. Natl. Acad. Sci. U.S.A. 100:8298-8303(2003).
Web links:
Official genome site(s):
http://blast.mpi-bremen.de/m_status_pirellula.php
Other web sites:
CBS: http://www.cbs.dtu.dk/services/GenomeAtlas/show-genus.php?kingdom=Bacteria&GLgenus=Rhodopirellula&GLspecies=baltica&GLstrain=strain1
Entrez Genome Project: http://www.ncbi.nlm.nih.gov/sites/entrez?Db=genomeprj&Cmd=DetailsSearch&Term=txid117%5Borgn%5D
GIB (DDBJ): http://gib.genes.nig.ac.jp/single/index.php?spid=Pire_STRAIN1
JVCI CMR: http://cmr.jcvi.org/tigr-scripts/CMR/GenomePage.cgi?database=ntps02
Karyn's Genomes: http://www.ebi.ac.uk/2can/genomes/bacteria/Pirellula.html
PEDANT: http://pedant.gsf.de/pedant3htmlview/pedant3view?Method=analysis&Db=p3_p413_Rho_balti
 EBI Proteome Analysis page



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