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Species code:	SHEB5
Taxonomy:	Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewanella (TaxID: 325240) [NEWT/ NCBI]
Description:	Shewanella are facultatively anaerobic, Gram-negative bacteria, motile by polar flagella, rod-like, and generally associated with aquatic or marine environments. They are capable of using a variety of compounds as electron acceptors, including oxygen, iron, manganese, uranium, nitrate, nitrite, fumarate, to name but a few. This ability makes Shewanella important for bioremediation of contaminated metals and radioactive wastes. The genus Shewanella comprises 36 recognized and hundreds of uncharacterized cultivable species. Shewanella baltica, isolated from the Baltic Sea, is able to grow at 4 degrees C but not 37, unlike other Shewanella species. Under anaerobic conditions, oxidation of organic matter can be coupled to the reduction of nitrate, Fe(III) and sulfur compounds. OS155 is unable to produce an FeS precipitate on TSI agar medium, whereas OS195 can do so. OS155 does not produce N-acetyl-b-glucosaminidase, or chymotrypsin. It can use gentiobiose, cellobiose, sucrose, d-gluconate and citrate but not glycogen, malate or dextrin as sole sources of carbon and energy. OS195 can also use these latter three substrates (based on PubMed 9542087).
Properties:	Presence of flagella: Yes Human pathogen: No Interaction: No Number of membranes: 2 Number of inteins:0
Statistics:	Number of SHEB5 entries in the UniProt Knowledgebase: 4223 (430 in UniProtKB/Swiss-Prot + 3793 in UniProtKB/TrEMBL)

Genome structure:	• Chromosome EMBL accession number CP000563 (circular; 5,127,376 bp) (download entry) • Plasmid pSbal01 EMBL accession number CP000564 (circular; 116,763 bp) (download entry) • Plasmid pSbal02 EMBL accession number CP000565 (circular; 74,000 bp) (download entry) • Plasmid pSbal03 EMBL accession number CP000566 (circular; 16,762 bp) (download entry) • Plasmid pSbal04 EMBL accession number CP000567 (circular; 7,995 bp) (download entry)
Reference(s):	[1] Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Sims D.R., Brettin T., Bruce D., Han C., Tapia R., Brainard J., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Brettar I., Klappenbach J., Konstantinidis K., Rodrigues J., Tiedje J., Richardson P. ; "Complete sequence of chromosome of Shewanella baltica OS155."; Submitted (FEB-2007) to the EMBL/GenBank/DDBJ databases. [2] Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Sims D.R., Brettin T., Bruce D., Han C., Tapia R., Brainard J., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Brettar I., Klappenbach J., Konstantinidis K., Rodrigues J., Tiedje J., Richardson P. ; "Complete sequence of plasmid pSbal01 of Shewanella baltica OS155."; Submitted (FEB-2007) to the EMBL/GenBank/DDBJ databases. [3] Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Sims D.R., Brettin T., Bruce D., Han C., Tapia R., Brainard J., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Brettar I., Klappenbach J., Konstantinidis K., Rodrigues J., Tiedje J., Richardson P. ; "Complete sequence of plasmid pSbal02 of Shewanella baltica OS155."; Submitted (FEB-2007) to the EMBL/GenBank/DDBJ databases. [4] Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Sims D.R., Brettin T., Bruce D., Han C., Tapia R., Brainard J., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Brettar I., Klappenbach J., Konstantinidis K., Rodrigues J., Tiedje J., Richardson P. ; "Complete sequence of plasmid pSbal03 of Shewanella baltica OS155."; Submitted (FEB-2007) to the EMBL/GenBank/DDBJ databases. [5] Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Sims D.R., Brettin T., Bruce D., Han C., Tapia R., Brainard J., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Brettar I., Klappenbach J., Konstantinidis K., Rodrigues J., Tiedje J., Richardson P. ; "Complete sequence of plasmid pSbal04 of Shewanella baltica OS155."; Submitted (FEB-2007) to the EMBL/GenBank/DDBJ databases.
Web links:	Entrez Genome Project: http://www.ncbi.nlm.nih.gov/sites/entrez?Db=genomeprj&cmd=ShowDetailView&TermToSearch=13386 GIB (DDBJ): http://gib.genes.nig.ac.jp/single/index.php?spid=Sbal_OS155  EBI Proteome Analysis page

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