HAMAP: Shewanella baltica (strain OS185) complete proteome
General information

Species:  Shewanella baltica (strain OS185)
Species code: SHEB8
Taxonomy: Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewanella (TaxID: 402882) [NEWT/ NCBI]
Description: Shewanella are facultatively anaerobic, Gram-negative bacteria, motile by polar flagella, rod-like, and generally associated with aquatic or marine environments. . They are capable of using a variety of compounds as electron acceptors, including oxygen, iron, manganese, uranium, nitrate, nitrite, fumarate, to name but a few. This ability makes Shewanella important for bioremediation of contaminated metals and radioactive wastes. The genus Shewanella comprises 36 recognized and hundreds of uncharacterized cultivable species.

Shewanella baltica, isolated from the Baltic Sea, is able to grow at 4 degrees C but not 37, unlike other Shewanella species. Under anaerobic conditions, oxidation of organic matter can be coupled to the reduction of nitrate, Fe(III) and sulfur compounds.
Properties: Presence of flagella: Yes
Human pathogen: No
Interaction: No
Number of membranes: 2
Number of inteins:0
Statistics: Number of SHEB8 entries in the UniProt Knowledgebase: 4367 (452 in UniProtKB/Swiss-Prot + 3915 in UniProtKB/TrEMBL)


Genome(s) sequenced

Strain:    OS185
Genome structure:
• Chromosome EMBL accession number CP000753 (circular; 5,229,686 bp) (download entry)
• Plasmid pS18501 EMBL accession number CP000754 (circular; 83,224 bp) (download entry)
Reference(s):
[1] Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Sims D., Brettin T., Bruce D., Detter J.C., Han C., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Brettar I., Rodrigues J., Konstantinidis K., Tiedje J., Richardson P. ;
"Complete sequence of chromosome of Shewanella baltica OS185.";
Submitted (JUL-2007) to the EMBL/GenBank/DDBJ databases.
[2] Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Sims D., Brettin T., Bruce D., Detter J.C., Han C., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Brettar I., Rodrigues J., Konstantinidis K., Tiedje J., Richardson P. ;
"Complete sequence of plasmid pS18501 of Shewanella baltica OS185.";
Submitted (JUL-2007) to the EMBL/GenBank/DDBJ databases.
Web links:
Official genome site(s):
http://genome.jgi-psf.org/finished_microbes/sheb1/sheb1.info.html
Other web sites:
Entrez Genome Project: http://www.ncbi.nlm.nih.gov/sites/entrez?db=genomeprj&cmd=Retrieve&dopt=Overview&list_uids=17643
GIB (DDBJ): http://gib.genes.nig.ac.jp/single/index.php?spid=Sbal_OS185
 EBI Proteome Analysis page



Tools