HAMAP: Shewanella sp. (strain ANA-3) complete proteome
General information

Species:  Shewanella sp. (strain ANA-3)
Species code: SHESA
Taxonomy: Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewanella (TaxID: 94122) [NEWT/ NCBI]
Description: Shewanella are facultatively anaerobic, Gram-negative bacteria, motile by polar flagella, rod-like, and generally associated with aquatic or marine environments. . They are capable of using a variety of compounds as electron acceptors, including oxygen, iron, manganese, uranium, nitrate, nitrite, fumarate, to name but a few. This ability makes Shewanella important for bioremediation of contaminated metals and radioactive wastes. The genus Shewanella comprises 36 recognized and hundreds of uncharacterized cultivable species.

Shewanella strain ANA-3 was originally isolated from a wooden pier within a brackish estuarine environment at Woods Hole, USA, and is characterized by a unique As(V) respiratory metabolism and a remarkable salinity tolerance range. Moreover, ANA-3 grows faster and at higher temperatures (37 C) than many other Shewanella species. However, it does not grow with DMSO as terminal electron acceptor, as most Shewanella species do (adapted from http://genome.jgi-psf.org/she_a/she_a.home.html).
Properties: Presence of flagella: Yes
Human pathogen: No
Interaction: No
Number of membranes: 2
Number of inteins:0
Statistics: Number of SHESA entries in the UniProt Knowledgebase: 4341 (463 in UniProtKB/Swiss-Prot + 3878 in UniProtKB/TrEMBL)


Genome(s) sequenced

Strain:    ANA-3
Genome structure:
• Chromosome EMBL accession number CP000469 (circular; 4,972,204 bp) (download entry)
• Plasmid pANA-3 EMBL accession number CP000470 (circular; 278,942 bp) (download entry)
Reference(s):
[1] Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Chertkov O., Brettin T., Bruce D., Han C., Tapia R., Gilna P., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Kim E., Newman D., Salticov C., Konstantinidis K., Klappenback J., Tiedje J., Richardson P. ;
"Complete sequence of chromosome 1 of Shewanella sp. ANA-3.";
Submitted (SEP-2006) to the EMBL/GenBank/DDBJ databases.
[2] Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Chertkov O., Brettin T., Bruce D., Han C., Tapia R., Gilna P., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Kim E., Newman D., Salticov C., Konstantinidis K., Klappenback J., Tiedje J., Richardson P. ;
"Complete sequence of plasmid 1 of Shewanella sp. ANA-3.";
Submitted (SEP-2006) to the EMBL/GenBank/DDBJ databases.
Web links:
Official genome site(s):
http://genome.jgi-psf.org/she_a/she_a.home.html
Other web sites:
Entrez Genome Project: http://www.ncbi.nlm.nih.gov/sites/entrez?Db=genomeprj&Cmd=DetailsSearch&Term=txid94122%5Borgn%5D
GIB (DDBJ): http://gib.genes.nig.ac.jp/single/index.php?spid=Shew_ANA3
PEDANT: http://pedant.gsf.de/pedant3htmlview/pedant3view?Method=analysis&Db=p3_p13905_She_ANA3
 EBI Proteome Analysis page



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