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HAMAP: Streptococcus pneumoniae serotype 19F (strain G54) complete proteome
General information

Species:  Streptococcus pneumoniae serotype 19F (strain G54)
Species code: STRP4
Taxonomy: Bacteria; Firmicutes; Lactobacillales; Streptococcaceae; Streptococcus (TaxID: 512566) [NEWT/ NCBI]
Description: Streptococci are non-motile, Gram-positive cocci with widely varying pathogenic potential that occur in pairs or chains. Streptococcus pneumoniae is the most common bacterial cause of acute respiratory infection and otitis media, and is estimated to result in over 1 millions deaths in children, the elderly, debilitated and immunosuppressed people every year. Since 1990 the number of penicillin-resistant strains has increased and many strains are now resistant to commonly prescribed antibiotics such as penicillin, macrolides and fluoroquinones. Strain G54 is a Italian clinical isolate resistant to macrolides and tetracycline. It was sequenced as a draft genome in 2001 and has been recently completed. Miltilocus sequence typing has identified this strain as serogroup 15, but the capsular locus is serotype 19F, indicating the strain has probably undergone transformation.
Properties: Presence of flagella: No
Human pathogen: Yes
Interaction: Animal pathogen in Mammalia
Number of membranes: 1
Number of inteins:0
Statistics: Number of STRP4 entries in the UniProt Knowledgebase: 2106 (290 in UniProtKB/Swiss-Prot + 1816 in UniProtKB/TrEMBL)


Genome(s) sequenced

Strain:    G54
Genome structure:
Chromosome EMBL accession number CP001015 (circular; 2,078,953 bp) (download entry)
Reference(s):
[1] MEDLINE=21335329; PubMed=11442348; [ NCBI , EBI , Israel , Japan ]
Dopazo J., Mendoza A., Herrero J., Caldara F., Humbert Y., Friedli L., Guerrier M., Grand-Schenk E., Gandin C., de Francesco M., Polissi A., Buell G., Feger G., Garcia E., Peitsch M., Garcia-Bustos J.F. ;
"Annotated draft genomic sequence from a Streptococcus pneumoniae type 19F clinical isolate.";
Microb. Drug Resist. 7:99-125(2001).
[2] Mulas L., Trappetti C., Hakenbeck R., Iannelli F., Pozzi G., Davidsen T.M., Tettelin H., Oggioni M. ;
"Pneumococcal beta glucoside metabolism investigated by whole genome comparison.";
Submitted (MAR-2008) to the EMBL/GenBank/DDBJ databases.
Web links:
Entrez Genome Project: http://www.ncbi.nlm.nih.gov/sites/entrez?Db=genomeprj&cmd=ShowDetailView&TermToSearch=29047
GIB (DDBJ): http://gib.genes.nig.ac.jp/single/index.php?spid=Spne_G54
PEDANT: http://pedant.gsf.de/pedant3htmlview/pedant3view?Method=analysis&Db=p3_p29047_Str_pneum
 EBI Proteome Analysis page



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