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HAMAP: Synechocystis sp. (strain ATCC 27184 / PCC 6803 / N-1) complete proteome
General information

Species:  Synechocystis sp. (strain ATCC 27184 / PCC 6803 / N-1)
Species code: SYNY3
Taxonomy: Bacteria; Cyanobacteria; Chroococcales; Synechocystis (TaxID: 1111708) [NEWT/ NCBI]
Description: Cyanobacterium that carries a complete set of genes for oxygenic photosynthesis.
Properties: Presence of flagella: No
Human pathogen: No
Interaction: No
Number of membranes: 2
Number of inteins: 4 in 4 different sequences
Statistics: Number of SYNY3 entries in the UniProt Knowledgebase: 1026 (1026 in UniProtKB/Swiss-Prot + 0 in UniProtKB/TrEMBL)


Genome(s) sequenced

Strain:    ATCC 27184 / PCC 6803 / N-1
Genome structure:
• Chromosome EMBL accession number BA000022 (circular; 3,573,470 bp) (download entry)
• Plasmid pSYSM EMBL accession number AP004310 (circular; 119,895 bp) (download entry)
• Plasmid pSYSA EMBL accession number AP004311 (circular; 103,307 bp) (download entry)
• Plasmid pSYSG EMBL accession number AP004312 (circular; 44,343 bp) (download entry)
• Plasmid pSYSX EMBL accession number AP006585 (circular; 106,004 bp) (download entry)
Reference(s):
[1] MEDLINE=97061201; PubMed=8905231; [ NCBI , EBI , Israel , Japan ]
Kaneko T., Sato S., Kotani H., Tanaka A., Asamizu E., Nakamura Y., Miyajima N., Hirosawa M., Sugiura M., Sasamoto S., Kimura T., Hosouchi T., Matsuno A., Muraki A., Nakazaki N., Naruo K., Okumura S., Shimpo S., Takeuchi C., Wada T., Watanabe A., Yamada M., Yasuda M., Tabata S. ;
"Sequence analysis of the genome of the unicellular cyanobacterium Synechocystis sp. strain PCC6803. II. Sequence determination of the entire genome and assignment of potential protein-coding regions.";
DNA Res. 3:109-136(1996).
[2] PubMed=14686584; [ NCBI , EBI , Israel , Japan ]
Kaneko T., Nakamura Y., Sasamoto S., Watanabe A., Kohara M., Matsumoto M., Shimpo S., Yamada M., Tabata S. ;
"Structural analysis of four large plasmids harboring in a unicellular cyanobacterium, Synechocystis sp. PCC 6803.";
DNA Res. 10:221-228(2003).
Web links:
Official genome site(s):
http://bacteria.kazusa.or.jp/cyanobase/Synechocystis/index.html
Other web sites:
Entrez Genome Project: http://www.ncbi.nlm.nih.gov/sites/entrez?Db=genomeprj&Cmd=DetailsSearch&Term=txid1148%5Borgn%5D
Genome Atlas: http://www.cbs.dtu.dk/services/gwBrowser/project.php?pid=60
GIB (DDBJ): http://gib.genes.nig.ac.jp/single/index.php?spid=Syne_PCC6803
JVCI CMR: http://cmr.jcvi.org/tigr-scripts/CMR/GenomePage.cgi?database=ntss01
Karyn's Genomes: http://www.ebi.ac.uk/2can/genomes/bacteria/Synechocystis.html
PEDANT: http://pedant.gsf.de/pedant3htmlview/pedant3view?Method=analysis&Db=p3_p60_Syn_PCC68
 EBI Proteome Analysis page
 UniProtKB/Swiss-Prot document



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