HAMAP: Thermosipho africanus (strain TCF52B) complete proteome
General information

Species:  Thermosipho africanus (strain TCF52B)
Species code: THEAB
Taxonomy: Bacteria; Thermotogae; Thermotogales; Thermotogaceae; Thermosipho (TaxID: 484019) [NEWT/ NCBI]
Description: Thermosipho africanus (strain TCF52B) is a rod-shaped, thermophilic, anaerobic bacterium isolated from produced fluids of a high temperature oil reservoir in the North Sea using fish-waste as the only substrate. It has the characteristic morphology of one or more cells contained in a sheath-like envelope which extends beyond the cell wall. Preliminary sequencing of Thermotogales genomes has identified extensive horizontal gene transfer between these organisms and the Archaea.
Properties: Presence of flagella: Yes
Human pathogen: No
Interaction: No
Number of membranes: 2
Number of inteins:0
Statistics: Number of THEAB entries in the UniProt Knowledgebase: 1918 (184 in UniProtKB/Swiss-Prot + 1734 in UniProtKB/TrEMBL)


Genome(s) sequenced

Strain:    TCF52B
Genome structure:
Chromosome EMBL accession number CP001185 (circular; 2,016,657 bp) (download entry)
Reference(s):
[1] PubMed=19124572; [ NCBI , EBI , Israel , Japan ]
Nesboe C.L., Bapteste E., Curtis B., Dahle H., Lopez P., Macleod D., Dlutek M., Bowman S., Zhaxybayeva O., Birkeland N.-K., Doolittle W.F. ;
"The genome of Thermosipho africanus TCF52B: lateral genetic connections to the Firmicutes and Archaea.";
J. Bacteriol. 191:1974-1978(2009).
Web links:
Entrez Genome Project: http://www.ncbi.nlm.nih.gov/sites/entrez?Db=genomeprj&cmd=ShowDetailView&TermToSearch=27767
Genome Atlas: http://www.cbs.dtu.dk/services/gwBrowser/project.php?pid=27767
GIB (DDBJ): http://gib.genes.nig.ac.jp/single/index.php?spid=Tafr_TCF52B
 EBI Proteome Analysis page



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