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HAMAP: Xanthomonas campestris pv. campestris (strain B100) complete proteome
General information

Species:  Xanthomonas campestris pv. campestris (strain B100)
Species code: XANCB
Taxonomy: Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas (TaxID: 509169) [NEWT/ NCBI]
Description: The Xanthomonadaceae are a family of Gram negative bacteria belonging to the order Xanthomonadales in the gammaproteobacteria. They are typically characterized as environmental organisms and are found in soil and water, as well as plant tissues. Many Xanthomonadaceae, especially species from the genera Xanthomonas and Xylella, cause plant diseases. Only one, Stenotrophomonas maltophilia, has isolates known to be opportunistic human pathogens.

Xanthomonas campestris pv. campestris causes black rot, which affects crucifers such as Brassica and Arabidopsis. Symptoms include marginal leaf chlorosis and darkening of vascular tissue, accompanied by extensive wilting and necrosis. Xanthomonas campestris pv. campestris (strain B100) has been employed as a model strain to investigate the biosynthesis of cell wall polysaccharides. Its genome is made up of a single circular chromosome of 5079003 base pairs with 4471 protein-coding genes.
Properties: Presence of flagella: Yes
Human pathogen: No
Interaction: Plant pathogen
Number of membranes: 2
Number of inteins:0
Statistics: Number of XANCB entries in the UniProt Knowledgebase: 4410 (397 in UniProtKB/Swiss-Prot + 4013 in UniProtKB/TrEMBL)


Genome(s) sequenced

Strain:    B100
Genome structure:
Chromosome EMBL accession number AM920689 (circular; 5,079,002 bp) (download entry)
Reference(s):
[1] PubMed=18304669; [ NCBI , EBI , Israel , Japan ]
Vorhoelter F.-J., Schneiker S., Goesmann A., Krause L., Bekel T., Kaiser O., Linke B., Patschkowski T., Rueckert C., Schmid J., Sidhu V.K., Sieber V., Tauch A., Watt S.A., Weisshaar B., Becker A., Niehaus K., Puehler A. ;
"The genome of Xanthomonas campestris pv. campestris B100 and its use for the reconstruction of metabolic pathways involved in xanthan biosynthesis.";
J. Biotechnol. 134:33-45(2008).
Web links:
Official genome site(s):
http://www.genetik.uni-bielefeld.de/genomikplus/index.php?Itemid=53&id=52&option=com_content&task=view
Other web sites:
Entrez Genome Project: http://www.ncbi.nlm.nih.gov/sites/entrez?Db=genomeprj&cmd=ShowDetailView&TermToSearch=29801
GIB (DDBJ): http://gib.genes.nig.ac.jp/single/index.php?spid=Xcam_B100
 EBI Proteome Analysis page



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