HAMAP rule MF_00274
General rule information
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Accession | MF_00274 |
Dates | 1-JUN-2001 (Created)
1-JUN-2023 (Last updated, Version 30) |
Name | DNA_YbaB_EbfC |
Scope(s) |
Bacteria |
Template(s) | O51418 (EBFC_BORBU); Q9RXV7 (Y199_DEIRA); P0A8B5 (YBAB_ECOLI); P44711 (Y442_HAEIN); [ Recover all ] |
Triggered by |
HAMAP; MF_00274 (Get profile general information and statistics) |
Propagated annotation
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Identifier, protein and gene names
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case <OC:Escherichia> or <OC:Shigella> or <OC:Salmonella> | |
Identifier | YBAB |
Protein name | RecName: Full=Nucleoid-associated protein YbaB; |
Gene name | Name=ybaB; |
else case <OC:Borrelia> | |
Identifier | EBFC |
Protein name | RecName: Full=Nucleoid-associated protein EbfC; |
Gene name | Name=ebfC; |
else | |
Identifier | Ynnn |
Protein name | RecName: Full=Nucleoid-associated protein |
end case |
Comments
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FUNCTION | Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection. |
SUBUNIT | Homodimer. |
SUBCELLULAR LOCATION | Cytoplasm, nucleoid. |
SIMILARITY | Belongs to the YbaB/EbfC family. |
Keywords
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Gene Ontology
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GO:0003677; Molecular function:DNA binding |
GO:0043590; Cellular component:bacterial nucleoid |
GO:0005737; Cellular component:cytoplasm |
Cross-references
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Pfam | PF02575; YbaB_DNA_bd; 1; |
PIRSF | PIRSF004555; UCP004555; 1; |
NCBIfam | TIGR00103; DNA_YbaB_EbfC; 1; |
Features
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Additional information
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Size range | 94-133 amino acids |
Related rules |
None |
Fusion | Nter: None Cter: None |