HAMAP

Accession	MF_00335
Dates	1-JUN-2001 (Created) 21-APR-2011 (Last updated, Version 31)

Data class

Protein

Predictors

HAMAP; MF_00335; [distribution of match scores in UniProtKB];[seed alignment for MF_00335]

Names

RNase_Y

Identifier

RNY

Protein name

RecName: Full=Ribonuclease Y; Short=RNase Y; EC=3.1.-.-;

Gene name

rny

FUNCTION: Endoribonuclease that initiates mRNA decay (By similarity).

SUBCELLULAR LOCATION: Cell membrane; Single-pass membrane protein (By similarity).

SIMILARITY: Belongs to the RNase Y family.

Pfam	PF01966; HD; 1; trigger=Yes; PF00013; KH_1; 1;
TIGRFAMs	TIGR00277; HDIG; 1; TIGR03319; YmdA_YtgF; 1;
PROSITE	PS50084; KH_TYPE_1; 1; trigger=PRU00117;
General	Transmembrane; -; 0-1; trigger=Yes;

Endonuclease, Hydrolase, Nuclease, RNA-binding.

Cell membrane, Membrane, Transmembrane, Transmembrane helix.

GO:0003723; Molecular function: RNA binding.
GO:0004521; Molecular function: endoribonuclease activity.
GO:0006402; Biological process: mRNA catabolic process.
GO:0005886; Cellular component: plasma membrane.

Size range:	469-650 amino acids
Related UniRules:	None
Template:	Q2FZ08 (RNY_STAA8); O31774 (RNY_BACSU): [Recover all]
Scope:	Bacteria
Fusion:	Nter: None; Cter: None
Duplicate:	in BDEBA, LACBA, PEDPA
Plasmid encoded:	None