HAMAP annotation rule: MF_00382
Send feedback new


Accession MF_00382
Dates 1-JUN-2001 (Created)
9-JUN-2011 (Last updated, Version 30)
Data class Protein
Names Ribosomal_L20




case <OC:Bacteria> and not <OC:Cyanobacteria>
Identifier RL20
Protein name
RecName: Full=50S ribosomal protein L20;
Gene name rplT

else case <OC:Cyanobacteria>
Identifier RL20
Protein name
RecName: Full=50S ribosomal protein L20;
Gene name rplT, rpl20

else case <OG:Chloroplast>
Identifier RK20
Protein name
RecName: Full=50S ribosomal protein L20, chloroplastic;
Gene name rpl20
end case

FUNCTION: Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit (By similarity).

case <OG:Chloroplast>
SUBCELLULAR LOCATION: Plastid, chloroplast.
end case

SIMILARITY: Belongs to the ribosomal protein L20P family.
Pfam PF00453; Ribosomal_L20; 1;
PRINTS PR00062; RIBOSOMALL20; 1;
TIGRFAMs TIGR01032; RplT_bact; 1;
PROSITE PS00937; RIBOSOMAL_L20; 1;
GO:0019843; Molecular function: rRNA binding.
GO:0000027; Biological process: ribosomal large subunit assembly.

case <OG:Chloroplast>
GO:0009507; Cellular component: chloroplast.
end case




Size range: 110-139 amino acids
Related UniRules: None
Template: P0A7L3 (RL20_ECOLI); Q9RSW7 (RL20_DEIRA): [Recover all]
Scope: Bacteria
Plastid
Fusion: Nter: None; Cter: <Unknown>
Duplicate: None
Plasmid encoded: None
Comments: Fused with an unknown domain in ARTAT, ARTS2 and OENOB. AYWBP and ONYPE have an internal insert not taken into account in size range. CARRP is below the threshold and considered atypical.

View rule in raw text format (no links)